KEGG   PATHWAY: amiz00010
Entry
amiz00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Aminobacterium sp. MB27-C1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
amiz00010  Glycolysis / Gluconeogenesis
amiz00010

Module
amiz_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amiz00010]
amiz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:amiz00010]
amiz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amiz00010]
amiz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amiz00010]
Other DBs
GO: 0006096 0006094
Organism
Aminobacterium sp. MB27-C1 [GN:amiz]
Gene
RBH88_01535  [KO:K00001] [EC:1.1.1.1]
RBH88_01675  [KO:K00627] [EC:2.3.1.12]
RBH88_01680  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RBH88_01685  [KO:K00382] [EC:1.8.1.4]
RBH88_01800  [KO:K01610] [EC:4.1.1.49]
RBH88_01885  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
RBH88_02430  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
RBH88_02600  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RBH88_02605  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RBH88_03055  [KO:K01810] [EC:5.3.1.9]
RBH88_04750  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
RBH88_04910  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
RBH88_05060  vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RBH88_05065  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RBH88_05900  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
RBH88_05905  [KO:K00927] [EC:2.7.2.3]
RBH88_05910  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RBH88_06165  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RBH88_06170  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RBH88_06350  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
RBH88_06355  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
RBH88_06510  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RBH88_07345  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
RBH88_07450  [KO:K01624] [EC:4.1.2.13]
RBH88_07530  [KO:K24012]
RBH88_07550  [KO:K15635] [EC:5.4.2.12]
RBH88_07865  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RBH88_07870  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RBH88_08205  [KO:K00170] [EC:1.2.7.1]
RBH88_08210  porA; pyruvate ferredoxin oxidoreductase [KO:K00169] [EC:1.2.7.1]
RBH88_08215  [KO:K00171] [EC:1.2.7.1]
RBH88_08220  [KO:K00172] [EC:1.2.7.1]
RBH88_08435  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
RBH88_08735  [KO:K15635] [EC:5.4.2.12]
RBH88_08875  [KO:K00845] [EC:2.7.1.2]
RBH88_10840  [KO:K11645] [EC:4.1.2.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
amiz00020  Citrate cycle (TCA cycle)
amiz00030  Pentose phosphate pathway
amiz00500  Starch and sucrose metabolism
amiz00620  Pyruvate metabolism
amiz00640  Propanoate metabolism
amiz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

DBGET integrated database retrieval system