KEGG   PATHWAY: amus04120
Entry
amus04120                   Pathway                                
Name
Ubiquitin mediated proteolysis - Akanthomyces muscarius
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
amus04120  Ubiquitin mediated proteolysis
amus04120

Other DBs
GO: 0016567
Organism
Akanthomyces muscarius [GN:amus]
Gene
LMH87_010933  hypothetical protein [KO:K08770]
LMH87_000751  hypothetical protein [KO:K02977]
LMH87_009913  hypothetical protein [KO:K03178] [EC:6.2.1.45]
LMH87_009687  hypothetical protein [KO:K10684] [EC:6.2.1.45]
LMH87_000458  hypothetical protein [KO:K10685] [EC:6.2.1.45]
LMH87_003739  hypothetical protein [KO:K10686] [EC:6.2.1.64]
LMH87_006189  hypothetical protein [KO:K10573] [EC:2.3.2.23]
LMH87_005969  hypothetical protein [KO:K06688] [EC:2.3.2.23]
LMH87_003959  hypothetical protein [KO:K06689] [EC:2.3.2.23]
LMH87_006387  hypothetical protein [KO:K10575] [EC:2.3.2.23]
LMH87_007288  hypothetical protein [KO:K04555] [EC:2.3.2.23]
LMH87_009200  uncharacterized protein [KO:K10576] [EC:2.3.2.23]
LMH87_000874  hypothetical protein [KO:K10577]
LMH87_011309  hypothetical protein [KO:K04554] [EC:2.3.2.23]
LMH87_007361  hypothetical protein [KO:K04649] [EC:2.3.2.23]
LMH87_004877  hypothetical protein [KO:K10579] [EC:2.3.2.34]
LMH87_002206  hypothetical protein [KO:K10580] [EC:2.3.2.23]
LMH87_002689  hypothetical protein [KO:K02207] [EC:2.3.2.23]
LMH87_003835  hypothetical protein [KO:K10688] [EC:2.3.2.23 2.3.2.25]
LMH87_011497  hypothetical protein [KO:K10585] [EC:2.3.2.23]
LMH87_009070  uncharacterized protein [KO:K10589] [EC:2.3.2.26]
LMH87_000614  hypothetical protein [KO:K10590] [EC:2.3.2.26]
LMH87_011768  hypothetical protein [KO:K10591] [EC:2.3.2.26]
LMH87_011270  hypothetical protein [KO:K10592] [EC:2.3.2.26]
LMH87_009459  hypothetical protein [KO:K10597] [EC:2.3.2.27]
LMH87_009676  hypothetical protein [KO:K09561] [EC:2.3.2.27]
LMH87_008149  uncharacterized protein [KO:K10598] [EC:5.2.1.8]
LMH87_003133  hypothetical protein [KO:K10599] [EC:2.3.2.27]
LMH87_008222  uncharacterized protein [KO:K04706] [EC:2.3.2.-]
LMH87_004479  hypothetical protein [KO:K10601] [EC:2.3.2.27]
LMH87_008205  uncharacterized protein [KO:K03868] [EC:2.3.2.32]
LMH87_006381  hypothetical protein [KO:K03347]
LMH87_008849  uncharacterized protein [KO:K03094]
LMH87_000381  hypothetical protein [KO:K03362]
LMH87_011177  hypothetical protein [KO:K03361]
LMH87_011719  hypothetical protein [KO:K03361]
LMH87_008922  uncharacterized protein [KO:K10259]
LMH87_009303  hypothetical protein [KO:K03360]
LMH87_012340  hypothetical protein [KO:K03872]
LMH87_003709  hypothetical protein [KO:K03869]
LMH87_009885  hypothetical protein [KO:K10609]
LMH87_010559  hypothetical protein [KO:K10610]
LMH87_010477  hypothetical protein [KO:K10570]
LMH87_005976  hypothetical protein [KO:K03358]
LMH87_005562  hypothetical protein [KO:K03349]
LMH87_006143  hypothetical protein [KO:K03363]
LMH87_004494  hypothetical protein [KO:K03364]
LMH87_005458  hypothetical protein [KO:K03348]
LMH87_005870  hypothetical protein [KO:K03350]
LMH87_009855  hypothetical protein [KO:K03350]
LMH87_009724  hypothetical protein [KO:K03351]
LMH87_001834  hypothetical protein [KO:K03352]
LMH87_002563  hypothetical protein [KO:K03353]
LMH87_002458  hypothetical protein [KO:K03355]
LMH87_000250  hypothetical protein [KO:K03357]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
amus03050  Proteasome
KO pathway
ko04120   
LinkDB

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