KEGG   PATHWAY: ata00010
Entry
ata00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Agrobacterium tumefaciens S33
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ata00010  Glycolysis / Gluconeogenesis
ata00010

Module
ata_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ata00010]
ata_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ata00010]
Other DBs
GO: 0006096 0006094
Organism
Agrobacterium tumefaciens S33 [GN:ata]
Gene
AWN88_20515  glucokinase [KO:K00845] [EC:2.7.1.2]
AWN88_21565  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AWN88_15550  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
AWN88_08045  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
AWN88_13115  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
AWN88_08060  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
AWN88_08050  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AWN88_16655  phosphoglycerate kinase [KO:K15634] [EC:5.4.2.11]
AWN88_09030  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
AWN88_12290  eno; enolase [KO:K01689] [EC:4.2.1.11]
AWN88_07935  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
AWN88_23645  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
AWN88_12300  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
AWN88_12305  pyruvate dehydrogenase [KO:K00162] [EC:1.2.4.1]
AWN88_12310  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
AWN88_18040  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AWN88_12320  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AWN88_13330  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AWN88_22760  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
AWN88_15150  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
AWN88_12840  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
AWN88_01740  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AWN88_04025  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AWN88_16050  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
AWN88_18585  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AWN88_02120  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
AWN88_05435  aldose epimerase [KO:K01785] [EC:5.1.3.3]
AWN88_18465  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
AWN88_05475  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AWN88_19200  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ata00020  Citrate cycle (TCA cycle)
ata00030  Pentose phosphate pathway
ata00500  Starch and sucrose metabolism
ata00620  Pyruvate metabolism
ata00640  Propanoate metabolism
ata00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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