KEGG   PATHWAY: atho00970
Entry
atho00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Atrimonas thermophila
Class
Genetic Information Processing; Translation
Pathway map
atho00970  Aminoacyl-tRNA biosynthesis
atho00970

Organism
Atrimonas thermophila [GN:atho]
Gene
M15_06280  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
M15_06770  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
M15_06780  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
M15_06810  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
M15_07220  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
M15_07440  [KO:K01881] [EC:6.1.1.15]
M15_07740  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
M15_07750  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
M15_07980  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
M15_07990  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
M15_08000  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
M15_08620  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
M15_08970  [KO:K01873] [EC:6.1.1.9]
M15_09450  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
M15_09460  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
M15_09560  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
M15_10810  thrS_1; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
M15_10980  thrS_2; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
M15_11150  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
M15_11830  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
M15_12830  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
M15_13490  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
M15_13500  gltX_1; glutamate--tRNA ligase [KO:K09698] [EC:6.1.1.24]
M15_13600  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
M15_16810  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
M15_17820  gltX_2; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
M15_18050  metG_2; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
M15_t00010  [KO:K14233]
M15_t00020  [KO:K14234]
M15_t00030  [KO:K14236]
M15_t00040  [KO:K14234]
M15_t00060  [KO:K14219]
M15_t00070  [KO:K14228]
M15_t00080  [KO:K14228]
M15_t00090  [KO:K14232]
M15_t00100  [KO:K14228]
M15_t00110  [KO:K14220]
M15_t00120  [KO:K14218]
M15_t00130  [KO:K14219]
M15_t00140  [KO:K14225]
M15_t00150  [KO:K14229]
M15_t00160  [KO:K14228]
M15_t00170  [KO:K14237]
M15_t00180  [KO:K14237]
M15_t00190  [KO:K14222]
M15_t00200  [KO:K14225]
M15_t00210  [KO:K14231]
M15_t00220  [KO:K14221]
M15_t00230  [KO:K14228]
M15_t00240  [KO:K14237]
M15_t00250  [KO:K14237]
M15_t00260  [KO:K14222]
M15_t00270  [KO:K14225]
M15_t00280  [KO:K14231]
M15_t00290  [KO:K14221]
M15_t00300  [KO:K14226]
M15_t00310  [KO:K14237]
M15_t00320  [KO:K14225]
M15_t00330  [KO:K14224]
M15_t00340  [KO:K14224]
M15_t00350  [KO:K14219]
M15_t00360  [KO:K14230]
M15_t00370  [KO:K14235]
M15_t00380  [KO:K14232]
M15_t00400  [KO:K14234]
M15_t00410  [KO:K14228]
M15_t00420  [KO:K14218]
M15_t00430  [KO:K14227]
M15_t00440  [KO:K14233]
M15_t00450  [KO:K14230]
M15_t00460  [KO:K14223]
M15_t00470  [KO:K14219]
M15_t00480  [KO:K14235]
M15_t00490  [KO:K14223]
M15_t00500  [KO:K14233]
M15_t00510  [KO:K14229]
M15_t00520  [KO:K14232]
M15_t00530  [KO:K14233]
M15_t00540  [KO:K14218]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
atho00250  Alanine, aspartate and glutamate metabolism
atho00260  Glycine, serine and threonine metabolism
atho00270  Cysteine and methionine metabolism
atho00290  Valine, leucine and isoleucine biosynthesis
atho00300  Lysine biosynthesis
atho00330  Arginine and proline metabolism
atho00340  Histidine metabolism
atho00380  Tryptophan metabolism
atho00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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