KEGG   PATHWAY: aty00010
Entry
aty00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Acidiferrobacter thiooxydans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
aty00010  Glycolysis / Gluconeogenesis
aty00010

Module
aty_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:aty00010]
aty_M00002  Glycolysis, core module involving three-carbon compounds [PATH:aty00010]
Other DBs
GO: 0006096 0006094
Organism
Acidiferrobacter thiooxydans [GN:aty]
Gene
A9R16_010555  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
A9R16_010545  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
A9R16_000865  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
A9R16_010385  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
A9R16_002440  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
A9R16_013895  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A9R16_011990  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
A9R16_002425  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
A9R16_002430  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
A9R16_000750  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
A9R16_011565  hypothetical protein [KO:K15633] [EC:5.4.2.12]
A9R16_006035  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
A9R16_013005  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
A9R16_002435  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A9R16_007270  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
A9R16_012625  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
A9R16_012620  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
A9R16_012615  FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
A9R16_006420  NAD(P)/FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
A9R16_007265  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A9R16_013390  NAD(P)/FAD-dependent oxidoreductase [KO:K00382] [EC:1.8.1.4]
A9R16_007305  hypothetical protein [KO:K00169] [EC:1.2.7.1]
A9R16_007300  hypothetical protein [KO:K00170] [EC:1.2.7.1]
A9R16_007310  2-oxoacid:acceptor oxidoreductase family protein [KO:K00172] [EC:1.2.7.1]
A9R16_004560  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
A9R16_007175  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
A9R16_011540  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
A9R16_011805  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A9R16_012460  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
aty00020  Citrate cycle (TCA cycle)
aty00030  Pentose phosphate pathway
aty00500  Starch and sucrose metabolism
aty00620  Pyruvate metabolism
aty00640  Propanoate metabolism
aty00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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