KEGG   PATHWAY: azl00630
Entry
azl00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum sp. B510
Class
Metabolism; Carbohydrate metabolism
Pathway map
azl00630  Glyoxylate and dicarboxylate metabolism
azl00630

Module
azl_M00012  Glyoxylate cycle [PATH:azl00630]
azl_M00621  Glycine cleavage system [PATH:azl00630]
azl_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:azl00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum sp. B510 [GN:azl]
Gene
AZL_002190  [KO:K00015] [EC:1.1.1.26]
AZL_003910  glcB; malate synthase [KO:K01638] [EC:2.3.3.9]
AZL_004970  glcD; (S)-2-hydroxy-acid oxidase [KO:K00104] [EC:1.1.99.14]
AZL_004980  [KO:K11472] [EC:1.1.99.14]
AZL_004990  [KO:K11473] [EC:1.1.99.14]
AZL_006240  [KO:K17865] [EC:4.2.1.55]
AZL_007310  [KO:K00123] [EC:1.17.1.9]
AZL_007320  [KO:K00124]
AZL_007330  [KO:K00127]
AZL_010090  glyA; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AZL_013180  hutG; formiminoglutamase [KO:K01458] [EC:3.5.1.68]
AZL_015020  [KO:K01091] [EC:3.1.3.18]
AZL_015170  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AZL_015460  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZL_015850  gcvPB; glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
AZL_015860  gcvPA; glycine dehydrogenase subunit 1 [KO:K00282] [EC:1.4.4.2]
AZL_015870  gcvH; glycine cleavage system H protein [KO:K02437]
AZL_015880  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AZL_016090  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
AZL_019220  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AZL_021160  [KO:K01091] [EC:3.1.3.18]
AZL_021310  [KO:K05606] [EC:5.1.99.1]
AZL_023120  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AZL_023130  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
AZL_024380  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AZL_024440  acnA; aconitate hydratase 1 [KO:K27802]
AZL_025020  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AZL_025750  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AZL_025840  [KO:K07749] [EC:2.8.3.16]
AZL_026040  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AZL_a00150  nuoE; NADH dehydrogenase I chain E [KO:K00127]
AZL_a00160  [KO:K00124]
AZL_a00170  [KO:K00123] [EC:1.17.1.9]
AZL_a00190  [KO:K00126] [EC:1.17.1.9]
AZL_a02240  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
AZL_a02490  [KO:K01895] [EC:6.2.1.1]
AZL_a03230  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AZL_a03460  gcl; tartronate-semialdehyde synthase [KO:K01608] [EC:4.1.1.47]
AZL_a03520  [KO:K01577] [EC:4.1.1.8]
AZL_a03530  [KO:K07749] [EC:2.8.3.16]
AZL_a03620  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AZL_a04730  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AZL_a05720  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AZL_a05960  glyA; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AZL_a08400  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
AZL_a09590  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AZL_c00060  hutG; formiminoglutamase [KO:K01458] [EC:3.5.1.68]
AZL_c00160  cat; catalase [KO:K03781] [EC:1.11.1.6]
AZL_c00640  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AZL_c01670  glyA; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AZL_c03180  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AZL_c03210  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AZL_c03390  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
AZL_c04210  glcB; malate synthase [KO:K01638] [EC:2.3.3.9]
AZL_c04410  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AZL_c04760  mcmA1; methylmalonyl-CoA mutase N-terminal domain protein [KO:K01847] [EC:5.4.99.2]
AZL_c04770  pccA; propionyl-CoA carboxylase alpha chain [KO:K01965] [EC:6.4.1.3]
AZL_c04780  pccB; propionyl-CoA carboxylase beta chain [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AZL_d00840  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
AZL_d01180  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AZL_d01190  gip; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AZL_d02620  [KO:K01647] [EC:2.3.3.1]
AZL_d04270  [KO:K00122] [EC:1.17.1.9]
AZL_e03790  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
AZL_e04020  eda; 2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
azl00010  Glycolysis / Gluconeogenesis
azl00020  Citrate cycle (TCA cycle)
azl00030  Pentose phosphate pathway
azl00053  Ascorbate and aldarate metabolism
azl00071  Fatty acid degradation
azl00230  Purine metabolism
azl00250  Alanine, aspartate and glutamate metabolism
azl00260  Glycine, serine and threonine metabolism
azl00270  Cysteine and methionine metabolism
azl00620  Pyruvate metabolism
azl00710  Carbon fixation by Calvin cycle
azl00750  Vitamin B6 metabolism
azl00910  Nitrogen metabolism
KO pathway
ko00630   

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