KEGG   PATHWAY: bage00030
Entry
bage00030                   Pathway                                
Name
Pentose phosphate pathway - Buttiauxella agrestis
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bage00030  Pentose phosphate pathway
bage00030

Module
bage_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bage00030]
bage_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bage00030]
bage_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bage00030]
bage_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bage00030]
bage_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:bage00030]
bage_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:bage00030]
Other DBs
GO: 0006098
Organism
Buttiauxella agrestis [GN:bage]
Gene
BADSM9389_38290  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BADSM9389_06480  cupin domain-containing protein [KO:K06859] [EC:5.3.1.9]
BADSM9389_06490  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
BADSM9389_17560  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BADSM9389_28830  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
BADSM9389_36480  lactonase family protein [KO:K07404] [EC:3.1.1.31]
BADSM9389_15050  phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BADSM9389_03110  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BADSM9389_07130  transketolase [KO:K00615] [EC:2.2.1.1]
BADSM9389_11360  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
BADSM9389_21860  transketolase [KO:K00615] [EC:2.2.1.1]
BADSM9389_21870  transketolase [KO:K00615] [EC:2.2.1.1]
BADSM9389_06240  transaldolase [KO:K00616] [EC:2.2.1.2]
BADSM9389_11370  transaldolase [KO:K00616] [EC:2.2.1.2]
BADSM9389_07340  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
BADSM9389_05960  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
BADSM9389_41710  ribokinase [KO:K00852] [EC:2.7.1.15]
BADSM9389_03170  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BADSM9389_05980  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BADSM9389_29270  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BADSM9389_38210  ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
BADSM9389_23660  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BADSM9389_17570  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
BADSM9389_17580  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BADSM9389_34210  glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase [KO:K00117] [EC:1.1.5.2]
BADSM9389_01910  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BADSM9389_01190  gluconokinase [KO:K00851] [EC:2.7.1.12]
BADSM9389_00560  sugar kinase [KO:K00874] [EC:2.7.1.45]
BADSM9389_01930  sugar kinase [KO:K00874] [EC:2.7.1.45]
BADSM9389_30440  glycerate kinase [KO:K11529] [EC:2.7.1.165]
BADSM9389_06500  PTS system mannose/fructose/sorbose family transporter subunit IID [KO:K17467]
BADSM9389_14430  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
BADSM9389_02310  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BADSM9389_38450  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BADSM9389_07240  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BADSM9389_36820  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
BADSM9389_40770  fructose-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
BADSM9389_07190  class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
BADSM9389_40840  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
BADSM9389_02340  permease [KO:K00850] [EC:2.7.1.11]
BADSM9389_24460  6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
bage00010  Glycolysis / Gluconeogenesis
bage00040  Pentose and glucuronate interconversions
bage00052  Galactose metabolism
bage00230  Purine metabolism
bage00240  Pyrimidine metabolism
bage00340  Histidine metabolism
bage00630  Glyoxylate and dicarboxylate metabolism
bage00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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