KEGG   PATHWAY: cbaa00970
Entry
cbaa00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Serpentinimonas raichei
Class
Genetic Information Processing; Translation
Pathway map
cbaa00970  Aminoacyl-tRNA biosynthesis
cbaa00970

Organism
Serpentinimonas raichei [GN:cbaa]
Gene
SRAA_0176  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
SRAA_0240  lysS; lysyl-tRNA synthetase class II [KO:K04567] [EC:6.1.1.6]
SRAA_0473  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
SRAA_0643  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
SRAA_0863  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
SRAA_0867  pheS; phenylalanyl-tRNA synthetase alpha subunit [KO:K01889] [EC:6.1.1.20]
SRAA_0868  [KO:K01890] [EC:6.1.1.20]
SRAA_0908  [KO:K01886] [EC:6.1.1.18]
SRAA_1233  [KO:K01875] [EC:6.1.1.11]
SRAA_1250  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
SRAA_1295  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
SRAA_1479  gltX; glutamyl- and glutaminyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
SRAA_1522  [KO:K01873] [EC:6.1.1.9]
SRAA_1555  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
SRAA_1612  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
SRAA_1742  [KO:K01867] [EC:6.1.1.2]
SRAA_1764  gatC; asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
SRAA_1765  gatA; asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
SRAA_1766  gatB; asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit, PET112 homolog [KO:K02434] [EC:6.3.5.6 6.3.5.7]
SRAA_1780  [KO:K01870] [EC:6.1.1.5]
SRAA_1827  [KO:K01879] [EC:6.1.1.14]
SRAA_1828  glyQ; glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
SRAA_1962  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
SRAA_2150  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
SRAA_2276  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
SRAA_t0001  [KO:K14230]
SRAA_t0002  [KO:K14237]
SRAA_t0003  [KO:K14237]
SRAA_t0004  [KO:K14232]
SRAA_t0005  [KO:K14228]
SRAA_t0006  [KO:K14225]
SRAA_t0007  [KO:K14222]
SRAA_t0008  [KO:K14225]
SRAA_t0009  [KO:K14228]
SRAA_t0010  [KO:K14228]
SRAA_t0011  [KO:K14229]
SRAA_t0012  [KO:K14225]
SRAA_t0013  [KO:K14233]
SRAA_t0014  [KO:K14219]
SRAA_t0015  [KO:K14237]
SRAA_t0016  [KO:K14226]
SRAA_t0017  [KO:K14233]
SRAA_t0018  [KO:K14230]
SRAA_t0019  [KO:K14223]
SRAA_t0020  [KO:K14219]
SRAA_t0021  [KO:K14233]
SRAA_t0022  [KO:K14234]
SRAA_t0023  [KO:K14232]
SRAA_t0024  [KO:K14221]
SRAA_t0025  [KO:K14224]
SRAA_t0026  [KO:K14218]
SRAA_t0027  [KO:K14228]
SRAA_t0028  [KO:K14228]
SRAA_t0029  [KO:K14234]
SRAA_t0030  [KO:K14233]
SRAA_t0031  [KO:K14220]
SRAA_t0032  [KO:K14230]
SRAA_t0033  [KO:K14219]
SRAA_t0034  [KO:K14232]
SRAA_t0035  [KO:K14231]
SRAA_t0036  [KO:K14219]
SRAA_t0037  [KO:K14235]
SRAA_t0038  [KO:K14234]
SRAA_t0039  [KO:K14225]
SRAA_t0040  [KO:K14236]
SRAA_t0041  [KO:K14227]
SRAA_t0042  [KO:K14218]
SRAA_t0043  [KO:K14227]
SRAA_t0044  [KO:K14218]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cbaa00250  Alanine, aspartate and glutamate metabolism
cbaa00260  Glycine, serine and threonine metabolism
cbaa00270  Cysteine and methionine metabolism
cbaa00290  Valine, leucine and isoleucine biosynthesis
cbaa00300  Lysine biosynthesis
cbaa00330  Arginine and proline metabolism
cbaa00340  Histidine metabolism
cbaa00380  Tryptophan metabolism
cbaa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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