KEGG   PATHWAY: cfir00330
Entry
cfir00330                   Pathway                                
Name
Arginine and proline metabolism - Cytobacillus firmus
Class
Metabolism; Amino acid metabolism
Pathway map
cfir00330  Arginine and proline metabolism
cfir00330

Module
cfir_M00015  Proline biosynthesis, glutamate => proline [PATH:cfir00330]
cfir_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:cfir00330]
cfir_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:cfir00330]
cfir_M00970  Proline degradation, proline => glutamate [PATH:cfir00330]
cfir_M00972  Proline metabolism [PATH:cfir00330]
Other DBs
GO: 0006525 0006560
Organism
Cytobacillus firmus [GN:cfir]
Gene
NAF01_10305  creatininase family protein [KO:K01470] [EC:3.5.2.10]
NAF01_23320  cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NAF01_08360  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K01585] [EC:4.1.1.19]
NAF01_24075  speB; agmatinase [KO:K01480] [EC:3.5.3.11]
NAF01_24080  speE; spermidine synthase [KO:K00797] [EC:2.5.1.16]
NAF01_12115  speD; adenosylmethionine decarboxylase [KO:K01611] [EC:4.1.1.50]
NAF01_19870  speD; adenosylmethionine decarboxylase [KO:K01611] [EC:4.1.1.50]
NAF01_11550  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
NAF01_12425  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NAF01_21970  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
NAF01_02850  GNAT family N-acetyltransferase [KO:K00657] [EC:2.3.1.57]
NAF01_07475  GNAT family N-acetyltransferase [KO:K00657] [EC:2.3.1.57]
NAF01_15635  GNAT family N-acetyltransferase [KO:K00657] [EC:2.3.1.57]
NAF01_24575  GNAT family N-acetyltransferase [KO:K00657] [EC:2.3.1.57]
NAF01_15125  flavin monoamine oxidase family protein [KO:K00274] [EC:1.4.3.4]
NAF01_04885  amidase family protein [KO:K01426] [EC:3.5.1.4]
NAF01_13705  amidase family protein [KO:K01426] [EC:3.5.1.4]
NAF01_10420  nitric oxide synthase oxygenase [KO:K00491] [EC:1.14.14.47]
NAF01_00995  rocF; arginase [KO:K01476] [EC:3.5.3.1]
NAF01_21090  ornithine--oxo-acid transaminase [KO:K00819] [EC:2.6.1.13]
NAF01_00880  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
NAF01_06110  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
NAF01_18070  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
NAF01_05650  proline dehydrogenase [KO:K00318] [EC:1.5.5.2]
NAF01_07470  proline dehydrogenase family protein [KO:K00318] [EC:1.5.5.2]
NAF01_01885  pruA; L-glutamate gamma-semialdehyde dehydrogenase [KO:K00294] [EC:1.2.1.88]
NAF01_21095  pruA; L-glutamate gamma-semialdehyde dehydrogenase [KO:K00294] [EC:1.2.1.88]
NAF01_00885  proB; glutamate 5-kinase [KO:K00931] [EC:2.7.2.11]
NAF01_13115  proB; glutamate 5-kinase [KO:K00931] [EC:2.7.2.11]
NAF01_00890  glutamate-5-semialdehyde dehydrogenase [KO:K00147] [EC:1.2.1.41]
NAF01_13110  glutamate-5-semialdehyde dehydrogenase [KO:K00147] [EC:1.2.1.41]
NAF01_15120  2OG-Fe(II) oxygenase [KO:K00472] [EC:1.14.11.2]
NAF01_15365  2-oxoglutarate-dependent dioxygenase [KO:K00472] [EC:1.14.11.2]
NAF01_17400  pyridoxal phosphate-dependent aminotransferase [KO:K00812] [EC:2.6.1.1]
NAF01_20360  dat; D-amino-acid transaminase [KO:K00824] [EC:2.6.1.21]
NAF01_21985  proline racemase family protein [KO:K01777] [EC:5.1.1.4]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
C20560  N1-(3-Aminopropyl)agmatine
C22886  N1-[(S)-3-amino-3-carboxypropyl]agmatine
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
cfir00020  Citrate cycle (TCA cycle)
cfir00220  Arginine biosynthesis
cfir00250  Alanine, aspartate and glutamate metabolism
cfir00260  Glycine, serine and threonine metabolism
cfir00270  Cysteine and methionine metabolism
cfir00310  Lysine degradation
cfir00410  beta-Alanine metabolism
cfir00470  D-Amino acid metabolism
cfir00480  Glutathione metabolism
cfir00630  Glyoxylate and dicarboxylate metabolism
cfir00650  Butanoate metabolism
cfir00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   
LinkDB

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