KEGG   PATHWAY: cof00970
Entry
cof00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Comamonas flocculans
Class
Genetic Information Processing; Translation
Pathway map
cof00970  Aminoacyl-tRNA biosynthesis
cof00970

Organism
Comamonas flocculans [GN:cof]
Gene
FOZ74_00020  [KO:K14228]
FOZ74_00120  [KO:K14237]
FOZ74_00505  [KO:K01873] [EC:6.1.1.9]
FOZ74_00630  [KO:K14220]
FOZ74_00635  [KO:K14220]
FOZ74_00975  [KO:K14232]
FOZ74_01010  [KO:K01881] [EC:6.1.1.15]
FOZ74_01080  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
FOZ74_01170  [KO:K14218]
FOZ74_01175  [KO:K14218]
FOZ74_01180  [KO:K14221]
FOZ74_01185  [KO:K14224]
FOZ74_01190  [KO:K01885] [EC:6.1.1.17]
FOZ74_02280  [KO:K14228]
FOZ74_02315  [KO:K14219]
FOZ74_02475  [KO:K14219]
FOZ74_03055  [KO:K14226]
FOZ74_03065  [KO:K14237]
FOZ74_03095  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
FOZ74_03115  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
FOZ74_03120  [KO:K01890] [EC:6.1.1.20]
FOZ74_03135  [KO:K14232]
FOZ74_03340  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
FOZ74_03345  [KO:K14225]
FOZ74_03440  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
FOZ74_03920  [KO:K14229]
FOZ74_04385  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
FOZ74_04640  [KO:K14230]
FOZ74_04870  [KO:K14218]
FOZ74_04875  [KO:K14227]
FOZ74_05050  [KO:K14219]
FOZ74_05520  [KO:K14219]
FOZ74_06280  [KO:K14231]
FOZ74_06350  [KO:K14235]
FOZ74_06360  [KO:K14234]
FOZ74_06365  [KO:K14225]
FOZ74_06370  [KO:K14236]
FOZ74_06385  [KO:K14218]
FOZ74_06390  [KO:K14227]
FOZ74_06510  [KO:K01869] [EC:6.1.1.4]
FOZ74_07060  [KO:K00604] [EC:2.1.2.9]
FOZ74_07675  [KO:K01887] [EC:6.1.1.19]
FOZ74_08550  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
FOZ74_08555  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
FOZ74_08560  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
FOZ74_08945  [KO:K14230]
FOZ74_09340  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
FOZ74_09350  [KO:K01879] [EC:6.1.1.14]
FOZ74_09580  [KO:K00604] [EC:2.1.2.9]
FOZ74_09980  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
FOZ74_10375  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
FOZ74_10380  [KO:K14233]
FOZ74_10475  [KO:K01866] [EC:6.1.1.1]
FOZ74_10790  [KO:K01867] [EC:6.1.1.2]
FOZ74_10980  [KO:K01886] [EC:6.1.1.18]
FOZ74_11070  [KO:K01883] [EC:6.1.1.16]
FOZ74_11090  [KO:K14233]
FOZ74_11235  [KO:K14233]
FOZ74_11685  [KO:K14229]
FOZ74_11830  [KO:K14228]
FOZ74_12185  [KO:K14234]
FOZ74_12485  [KO:K14237]
FOZ74_12530  [KO:K14233]
FOZ74_12725  [KO:K14225]
FOZ74_12730  [KO:K14222]
FOZ74_12735  [KO:K14225]
FOZ74_12740  [KO:K14228]
FOZ74_13255  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
FOZ74_13275  [KO:K14223]
FOZ74_13325  [KO:K14230]
FOZ74_13665  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FOZ74_13730  [KO:K14227]
FOZ74_13735  [KO:K14218]
FOZ74_13950  [KO:K14234]
FOZ74_14115  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
FOZ74_14195  [KO:K14232]
FOZ74_15360  [KO:K14228]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cof00250  Alanine, aspartate and glutamate metabolism
cof00260  Glycine, serine and threonine metabolism
cof00270  Cysteine and methionine metabolism
cof00290  Valine, leucine and isoleucine biosynthesis
cof00300  Lysine biosynthesis
cof00330  Arginine and proline metabolism
cof00340  Histidine metabolism
cof00380  Tryptophan metabolism
cof00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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