KEGG   PATHWAY: comm00010
Entry
comm00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Commensalibacter melissae ESL0284
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
comm00010  Glycolysis / Gluconeogenesis
comm00010

Module
comm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:comm00010]
comm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:comm00010]
comm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:comm00010]
Other DBs
GO: 0006096 0006094
Organism
Commensalibacter melissae ESL0284 [GN:comm]
Gene
GN303_01430  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
GN303_00500  bifunctional transaldolase/phosoglucose isomerase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
GN303_01110  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
GN303_03330  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
GN303_04675  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GN303_07330  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GN303_07335  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GN303_06595  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
GN303_04700  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GN303_08065  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GN303_08090  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GN303_00515  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
GN303_03465  pyruvate decarboxylase [KO:K01568] [EC:4.1.1.1]
GN303_00555  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GN303_07225  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
GN303_05770  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GN303_01150  hypothetical protein [KO:K01792] [EC:5.1.3.15]
GN303_02065  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
comm00020  Citrate cycle (TCA cycle)
comm00030  Pentose phosphate pathway
comm00500  Starch and sucrose metabolism
comm00620  Pyruvate metabolism
comm00640  Propanoate metabolism
comm00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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