KEGG   PATHWAY: cpot00970
Entry
cpot00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Citrobacter portucalensis
Class
Genetic Information Processing; Translation
Pathway map
cpot00970  Aminoacyl-tRNA biosynthesis
cpot00970

Organism
Citrobacter portucalensis [GN:cpot]
Gene
FOB25_00490  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
FOB25_00685  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
FOB25_00790  [KO:K14237]
FOB25_00795  [KO:K14237]
FOB25_01240  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
FOB25_01245  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
FOB25_01270  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
FOB25_02030  [KO:K14220]
FOB25_02040  [KO:K14220]
FOB25_02265  [KO:K14220]
FOB25_02725  [KO:K14233]
FOB25_02905  [KO:K14233]
FOB25_03095  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
FOB25_03275  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
FOB25_03345  [KO:K14233]
FOB25_03920  [KO:K14229]
FOB25_03925  [KO:K14229]
FOB25_03930  [KO:K14229]
FOB25_03935  [KO:K14237]
FOB25_03940  [KO:K14229]
FOB25_04350  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
FOB25_04390  [KO:K14230]
FOB25_04395  [KO:K14228]
FOB25_04400  [KO:K14223]
FOB25_04405  [KO:K14223]
FOB25_04410  [KO:K14230]
FOB25_04415  [KO:K14223]
FOB25_04420  [KO:K14223]
FOB25_04490  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
FOB25_05095  [KO:K14219]
FOB25_05165  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
FOB25_06340  [KO:K14234]
FOB25_06510  [KO:K14221]
FOB25_06565  [KO:K14221]
FOB25_06580  [KO:K14224]
FOB25_06620  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
FOB25_07495  [KO:K01872] [EC:6.1.1.7]
FOB25_07525  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
FOB25_07795  [KO:K14228]
FOB25_07800  [KO:K14228]
FOB25_07805  [KO:K14228]
FOB25_08445  [KO:K14228]
FOB25_08480  [KO:K01873] [EC:6.1.1.9]
FOB25_08600  [KO:K01042] [EC:2.9.1.1]
FOB25_08960  [KO:K14225]
FOB25_08965  [KO:K14225]
FOB25_08970  [KO:K14225]
FOB25_09130  [KO:K14231]
FOB25_09895  [KO:K14224]
FOB25_10055  [KO:K14234]
FOB25_10060  [KO:K14225]
FOB25_10065  [KO:K14236]
FOB25_10070  [KO:K14234]
FOB25_10105  [KO:K14218]
FOB25_10110  [KO:K14227]
FOB25_10745  [KO:K14218]
FOB25_10750  [KO:K14227]
FOB25_10990  [KO:K14232]
FOB25_10995  [KO:K14228]
FOB25_11000  [KO:K14226]
FOB25_11005  [KO:K14219]
FOB25_11170  [KO:K14235]
FOB25_11175  [KO:K14221]
FOB25_11190  [KO:K14224]
FOB25_11775  [KO:K14238]
FOB25_12105  [KO:K01042] [EC:2.9.1.1]
FOB25_12210  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
FOB25_12215  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
FOB25_12300  [KO:K14232]
FOB25_13120  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
FOB25_13535  [KO:K00604] [EC:2.1.2.9]
FOB25_13585  [KO:K14227]
FOB25_13590  [KO:K14218]
FOB25_13605  [KO:K14234]
FOB25_14095  [KO:K14228]
FOB25_14105  [KO:K14230]
FOB25_14835  [KO:K14230]
FOB25_15430  [KO:K14231]
FOB25_15810  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
FOB25_15825  [KO:K14225]
FOB25_16105  [KO:K14230]
FOB25_16110  [KO:K14230]
FOB25_16115  [KO:K14230]
FOB25_16795  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
FOB25_16805  [KO:K14233]
FOB25_16810  [KO:K14219]
FOB25_16815  [KO:K14219]
FOB25_16820  [KO:K14219]
FOB25_16825  [KO:K14219]
FOB25_17505  [KO:K14224]
FOB25_17925  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FOB25_18430  [KO:K14229]
FOB25_18435  [KO:K14237]
FOB25_18440  [KO:K14237]
FOB25_18445  [KO:K14237]
FOB25_18450  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
FOB25_18465  [KO:K14218]
FOB25_18470  [KO:K14218]
FOB25_18595  [KO:K14219]
FOB25_19230  [KO:K14232]
FOB25_19615  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
FOB25_20670  [KO:K14220]
FOB25_20680  [KO:K14233]
FOB25_20905  [KO:K14225]
FOB25_20910  [KO:K14222]
FOB25_20915  [KO:K14228]
FOB25_20945  [KO:K14219]
FOB25_21420  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
FOB25_21465  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
FOB25_22235  [KO:K14236]
FOB25_22245  [KO:K14236]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cpot00250  Alanine, aspartate and glutamate metabolism
cpot00260  Glycine, serine and threonine metabolism
cpot00270  Cysteine and methionine metabolism
cpot00290  Valine, leucine and isoleucine biosynthesis
cpot00300  Lysine biosynthesis
cpot00330  Arginine and proline metabolism
cpot00340  Histidine metabolism
cpot00380  Tryptophan metabolism
cpot00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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