KEGG   PATHWAY: dfn00970
Entry
dfn00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Dickeya fangzhongdai DSM 101947
Class
Genetic Information Processing; Translation
Pathway map
dfn00970  Aminoacyl-tRNA biosynthesis
dfn00970

Organism
Dickeya fangzhongdai DSM 101947 [GN:dfn]
Gene
CVE23_00260  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CVE23_00265  [KO:K01879] [EC:6.1.1.14]
CVE23_01090  [KO:K14224]
CVE23_01125  [KO:K14234]
CVE23_01130  [KO:K14236]
CVE23_01135  [KO:K14225]
CVE23_01140  [KO:K14234]
CVE23_01330  [KO:K14224]
CVE23_02130  [KO:K01873] [EC:6.1.1.9]
CVE23_02155  [KO:K14228]
CVE23_03220  [KO:K14231]
CVE23_03470  [KO:K14230]
CVE23_03585  [KO:K14228]
CVE23_03590  [KO:K14230]
CVE23_03735  [KO:K14228]
CVE23_03740  [KO:K14228]
CVE23_03745  [KO:K14228]
CVE23_03850  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CVE23_03885  [KO:K14225]
CVE23_05120  [KO:K14231]
CVE23_05255  [KO:K14230]
CVE23_05260  [KO:K14230]
CVE23_06590  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CVE23_06670  [KO:K14223]
CVE23_06675  [KO:K14230]
CVE23_06680  [KO:K14223]
CVE23_06685  [KO:K14223]
CVE23_06690  [KO:K14228]
CVE23_06695  [KO:K14230]
CVE23_06730  [KO:K01886] [EC:6.1.1.18]
CVE23_06945  [KO:K14229]
CVE23_06950  [KO:K14229]
CVE23_07095  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CVE23_08050  [KO:K14220]
CVE23_08880  [KO:K14220]
CVE23_08890  [KO:K14233]
CVE23_09505  [KO:K14232]
CVE23_10005  [KO:K01875] [EC:6.1.1.11]
CVE23_10370  [KO:K14233]
CVE23_10505  [KO:K01887] [EC:6.1.1.19]
CVE23_10545  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CVE23_10865  [KO:K14236]
CVE23_11995  [KO:K01890] [EC:6.1.1.20]
CVE23_12000  [KO:K01889] [EC:6.1.1.20]
CVE23_12020  [KO:K01868] [EC:6.1.1.3]
CVE23_13230  [KO:K01866] [EC:6.1.1.1]
CVE23_13310  [KO:K14237]
CVE23_13345  [KO:K14237]
CVE23_13640  [KO:K01893] [EC:6.1.1.22]
CVE23_14030  [KO:K14233]
CVE23_14385  [KO:K14228]
CVE23_14390  [KO:K14222]
CVE23_14395  [KO:K14225]
CVE23_14420  [KO:K14229]
CVE23_14435  [KO:K14220]
CVE23_15045  [KO:K14219]
CVE23_15260  [KO:K14219]
CVE23_15515  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CVE23_15920  [KO:K14233]
CVE23_16300  [KO:K01892] [EC:6.1.1.21]
CVE23_16640  [KO:K14218]
CVE23_16645  [KO:K14218]
CVE23_16655  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CVE23_16660  [KO:K14237]
CVE23_16665  [KO:K14237]
CVE23_16670  [KO:K14237]
CVE23_16675  [KO:K14229]
CVE23_16895  [KO:K14221]
CVE23_16930  [KO:K14221]
CVE23_16945  [KO:K14224]
CVE23_17055  [KO:K14219]
CVE23_17060  [KO:K14219]
CVE23_17065  [KO:K14219]
CVE23_17070  [KO:K14233]
CVE23_17080  [KO:K01872] [EC:6.1.1.7]
CVE23_17275  [KO:K14234]
CVE23_17555  [KO:K14234]
CVE23_17570  [KO:K14218]
CVE23_17575  [KO:K14227]
CVE23_17620  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CVE23_19185  [KO:K01870] [EC:6.1.1.5]
CVE23_19505  [KO:K14225]
CVE23_19555  [KO:K14225]
CVE23_19860  [KO:K01872] [EC:6.1.1.7]
CVE23_19880  [KO:K14225]
CVE23_20045  [KO:K14218]
CVE23_20050  [KO:K14227]
CVE23_20100  [KO:K00604] [EC:2.1.2.9]
CVE23_20495  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
CVE23_20950  [KO:K14232]
CVE23_20955  [KO:K14228]
CVE23_20960  [KO:K14226]
CVE23_20965  [KO:K14219]
CVE23_21155  [KO:K14235]
CVE23_21160  [KO:K14221]
CVE23_21175  [KO:K14218]
CVE23_21180  [KO:K14227]
CVE23_22035  [KO:K14232]
CVE23_22175  [KO:K14224]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
dfn00250  Alanine, aspartate and glutamate metabolism
dfn00260  Glycine, serine and threonine metabolism
dfn00270  Cysteine and methionine metabolism
dfn00290  Valine, leucine and isoleucine biosynthesis
dfn00300  Lysine biosynthesis
dfn00330  Arginine and proline metabolism
dfn00340  Histidine metabolism
dfn00380  Tryptophan metabolism
dfn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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