KEGG   PATHWAY: dfq00010
Entry
dfq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dyadobacter fanqingshengii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dfq00010  Glycolysis / Gluconeogenesis
dfq00010

Module
dfq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dfq00010]
dfq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dfq00010]
dfq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dfq00010]
Other DBs
GO: 0006096 0006094
Organism
Dyadobacter fanqingshengii [GN:dfq]
Gene
NFI81_03335  [KO:K25026]
NFI81_03860  [KO:K13979] [EC:1.1.1.2]
NFI81_05820  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
NFI81_07625  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NFI81_07965  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
NFI81_09870  [KO:K00131] [EC:1.2.1.9]
NFI81_10385  [KO:K00134] [EC:1.2.1.12]
NFI81_10825  [KO:K01624] [EC:4.1.2.13]
NFI81_11105  [KO:K00627] [EC:2.3.1.12]
NFI81_11135  [KO:K20866] [EC:3.1.3.10]
NFI81_13205  [KO:K01785] [EC:5.1.3.3]
NFI81_13425  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NFI81_13685  [KO:K01835] [EC:5.4.2.2]
NFI81_15490  [KO:K16370] [EC:2.7.1.11]
NFI81_16440  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
NFI81_16450  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
NFI81_18495  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NFI81_18870  [KO:K25026]
NFI81_19195  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
NFI81_19275  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
NFI81_20925  [KO:K00162] [EC:1.2.4.1]
NFI81_21700  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NFI81_23025  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
NFI81_24395  [KO:K01785] [EC:5.1.3.3]
NFI81_24980  [KO:K00927] [EC:2.7.2.3]
NFI81_25045  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dfq00020  Citrate cycle (TCA cycle)
dfq00030  Pentose phosphate pathway
dfq00500  Starch and sucrose metabolism
dfq00620  Pyruvate metabolism
dfq00640  Propanoate metabolism
dfq00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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