KEGG   PATHWAY: eck00030
Entry
eck00030                    Pathway                                
Name
Pentose phosphate pathway - Escherichia coli 55989 (EAEC)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
eck00030  Pentose phosphate pathway
eck00030

Module
eck_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:eck00030]
eck_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:eck00030]
eck_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:eck00030]
eck_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:eck00030]
eck_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:eck00030]
eck_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eck00030]
eck_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eck00030]
Other DBs
GO: 0006098
Organism
Escherichia coli 55989 (EAEC) [GN:eck]
Gene
EC55989_0009  talB; transaldolase B [KO:K00616] [EC:2.2.1.2]
EC55989_0117  gcd; glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
EC55989_0675  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EC55989_0747  pgl; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
EC55989_1303  prsA; phosphoribosylpyrophosphate synthase [KO:K00948] [EC:2.7.6.1]
EC55989_1890  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
EC55989_2028  eda; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
EC55989_2029  edd; 6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
EC55989_2030  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
EC55989_2288  gnd; gluconate-6-phosphate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
EC55989_2352  fbaB; fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
EC55989_2744  talA; transaldolase A [KO:K00616] [EC:2.2.1.2]
EC55989_2745  tktB; transketolase 2, thiamin-binding [KO:K00615] [EC:2.2.1.1]
EC55989_3202  rpiA; ribose 5-phosphate isomerase, constitutive [KO:K01807] [EC:5.3.1.6]
EC55989_3213  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
EC55989_3223  yggF; putative hexoseP phosphatase [KO:K02446] [EC:3.1.3.11]
EC55989_3227  tktA; transketolase 1, thiamin-binding [KO:K00615] [EC:2.2.1.1]
EC55989_3785  yhfW; putative mutase [KO:K01839] [EC:5.4.2.7]
EC55989_3791  rpe; D-ribulose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
EC55989_3846  gntK; gluconate kinase 2; gluconate transport, GNT I system [KO:K00851] [EC:2.7.1.12]
EC55989_3973  kdgK; ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
EC55989_4009  tiaE; 2-oxo-carboxylic acid reductase (glyoxalate reductase) (2-ketoaldonate reductase) [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
EC55989_4227  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
EC55989_4394  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
EC55989_4403  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
EC55989_4513  pgi; glucosephosphate isomerase [KO:K01810] [EC:5.3.1.9]
EC55989_4580  [KO:K01808] [EC:5.3.1.6]
EC55989_4585  phnN; ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
EC55989_4790  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
EC55989_4826  idnK; D-gluconate kinase, thermosensitive [KO:K00851] [EC:2.7.1.12]
EC55989_4933  deoK; Deoxyribokinase [KO:K00852] [EC:2.7.1.15]
EC55989_5043  deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked [KO:K01619] [EC:4.1.2.4]
EC55989_5045  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
eck00010  Glycolysis / Gluconeogenesis
eck00040  Pentose and glucuronate interconversions
eck00052  Galactose metabolism
eck00230  Purine metabolism
eck00240  Pyrimidine metabolism
eck00340  Histidine metabolism
eck00630  Glyoxylate and dicarboxylate metabolism
eck00750  Vitamin B6 metabolism
KO pathway
ko00030   

DBGET integrated database retrieval system