KEGG   PATHWAY: eclz00030
Entry
eclz00030                   Pathway                                
Name
Pentose phosphate pathway - Enterobacter hormaechei subsp. hormaechei
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
eclz00030  Pentose phosphate pathway
eclz00030

Module
eclz_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:eclz00030]
eclz_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:eclz00030]
eclz_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:eclz00030]
eclz_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:eclz00030]
eclz_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:eclz00030]
eclz_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eclz00030]
eclz_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:eclz00030]
eclz_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:eclz00030]
eclz_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eclz00030]
Other DBs
GO: 0006098
Organism
Enterobacter hormaechei subsp. hormaechei [GN:eclz]
Gene
LI64_01585  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LI64_03470  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
LI64_03475  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
LI64_16175  cytoplasmic protein [KO:K06859] [EC:5.3.1.9]
LI64_13025  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
LI64_06960  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
LI64_02585  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
LI64_13860  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
LI64_19980  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
LI64_14840  transketolase [KO:K00615] [EC:2.2.1.1]
LI64_14845  carbohydrate degradation protein [KO:K00615] [EC:2.2.1.1]
LI64_15310  transketolase [KO:K00615] [EC:2.2.1.1]
LI64_17515  transketolase [KO:K00615] [EC:2.2.1.1]
LI64_15305  transaldolase [KO:K00616] [EC:2.2.1.2]
LI64_03395  transaldolase [KO:K00616] [EC:2.2.1.2]
LI64_17475  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
LI64_16165  3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
LI64_16170  6-phospho 3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
LI64_03245  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
LI64_21770  ribokinase [KO:K00852] [EC:2.7.1.15]
LI64_03255  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
LI64_06635  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
LI64_01900  ribose-phosphate pyrophosphokinase [KO:K05774] [EC:2.7.4.23]
LI64_12410  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
LI64_13020  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
LI64_13015  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LI64_10295  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
LI64_03930  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
LI64_01225  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
LI64_20215  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
LI64_01235  2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
LI64_20795  ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
LI64_03480  PTS fructose transporter subunit IID [KO:K17467]
LI64_14085  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
LI64_17500  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
LI64_01855  hypothetical protein [KO:K01624] [EC:4.1.2.13]
LI64_02520  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
LI64_21355  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
LI64_21395  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
LI64_09190  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
eclz00010  Glycolysis / Gluconeogenesis
eclz00040  Pentose and glucuronate interconversions
eclz00052  Galactose metabolism
eclz00230  Purine metabolism
eclz00240  Pyrimidine metabolism
eclz00340  Histidine metabolism
eclz00630  Glyoxylate and dicarboxylate metabolism
eclz00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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