KEGG   PATHWAY: eoi00030
Entry
eoi00030                    Pathway                                
Name
Pentose phosphate pathway - Escherichia coli O111:H- 11128 (EHEC)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
eoi00030  Pentose phosphate pathway
eoi00030

Module
eoi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:eoi00030]
eoi_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:eoi00030]
eoi_M00006  Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH:eoi00030]
eoi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:eoi00030]
eoi_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:eoi00030]
eoi_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde-3P [PATH:eoi00030]
eoi_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde-3P [PATH:eoi00030]
Other DBs
GO: 0006098
Organism
Escherichia coli O111:H- 11128 (EHEC) [GN:eoi]
Gene
ECO111_0008  talB; transaldolase B [KO:K00616] [EC:2.2.1.2]
ECO111_0125  gcd; glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
ECO111_0708  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
ECO111_0777  ybhE; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
ECO111_1536  prsA; phosphoribosylpyrophosphate synthase [KO:K00948] [EC:2.7.6.1]
ECO111_2233  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
ECO111_2358  eda; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
ECO111_2359  edd; 6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
ECO111_2360  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
ECO111_2755  gnd; gluconate-6-phosphate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
ECO111_2813  fbaB; fructose-bisphosphate aldolase, class I [KO:K11645] [EC:4.1.2.13]
ECO111_3184  talA; transaldolase A [KO:K00616] [EC:2.2.1.2]
ECO111_3185  tktB; transketolase 2, thiamin-binding [KO:K00615] [EC:2.2.1.1]
ECO111_3651  rpiA; ribose 5-phosphate isomerase RpiA, constitutive [KO:K01807] [EC:5.3.1.6]
ECO111_3661  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
ECO111_3671  yggF; predicted hexoseP phosphatase [KO:K02446] [EC:3.1.3.11]
ECO111_3675  tktA; transketolase 1, thiamin-binding [KO:K00615] [EC:2.2.1.1]
ECO111_3677  [KO:K17463] [EC:4.1.2.14]
ECO111_3678  [KO:K17468] [EC:4.3.1.29]
ECO111_3679  [KO:K17467]
ECO111_3680  [KO:K17466]
ECO111_3681  [KO:K17465] [EC:2.7.1.203]
ECO111_3682  [KO:K17464] [EC:2.7.1.203]
ECO111_4189  yhfW; predicted mutase [KO:K01839] [EC:5.4.2.7]
ECO111_4195  rpe; D-ribulose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
ECO111_4247  gntK; gluconokinase 2 GntK, GNT I system [KO:K00851] [EC:2.7.1.12]
ECO111_4340  kdgK; ketodeoxygluconokinase KdgK [KO:K00874] [EC:2.7.1.45]
ECO111_4373  tiaE; 2-keto-D-gluconate reductase TiaE [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
ECO111_4586  rbsK; ribokinase RbsK [KO:K00852] [EC:2.7.1.15]
ECO111_4739  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
ECO111_4748  glpX; fructose 1,6-bisphosphatase II GlpX [KO:K02446] [EC:3.1.3.11]
ECO111_4847  pgi; glucosephosphate isomerase Pgi [KO:K01810] [EC:5.3.1.9]
ECO111_4961  [KO:K01808] [EC:5.3.1.6]
ECO111_4965  phnN; ribose 1,5-bisphosphokinase PhnN [KO:K05774] [EC:2.7.4.23]
ECO111_5117  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
ECO111_5241  deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked DeoC [KO:K01619] [EC:4.1.2.4]
ECO111_5243  deoB; phosphopentomutase DeoB [KO:K01839] [EC:5.4.2.7]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
eoi00010  Glycolysis / Gluconeogenesis
eoi00040  Pentose and glucuronate interconversions
eoi00052  Galactose metabolism
eoi00230  Purine metabolism
eoi00240  Pyrimidine metabolism
eoi00340  Histidine metabolism
eoi00630  Glyoxylate and dicarboxylate metabolism
eoi00750  Vitamin B6 metabolism
KO pathway
ko00030   

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