KEGG   PATHWAY: fiy00240
Entry
fiy00240                    Pathway                                
Name
Pyrimidine metabolism - Candidatus Filomicrobium marinum Y
Class
Metabolism; Nucleotide metabolism
Pathway map
fiy00240  Pyrimidine metabolism
fiy00240

Module
fiy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:fiy00240]
Other DBs
GO: 0006220 0006213
Organism
Candidatus Filomicrobium marinum Y [GN:fiy]
Gene
BN1229_v1_3055  carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
BN1229_v1_3052  carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase [KO:K01956] [EC:6.3.5.5]
BN1229_v1_0357  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
BN1229_v1_0129  Dihydroorotase, multifunctional complex type [KO:K01465] [EC:3.5.2.3]
BN1229_v1_0356  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
BN1229_v1_1799  pyrD; Dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
BN1229_v1_1200  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
BN1229_v1_0927  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
BN1229_v1_2938  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
BN1229_v1_3916  ndk; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase [KO:K00940] [EC:2.7.4.6]
BN1229_v1_3125  mazG; Nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
BN1229_v1_1986  Maf-like protein RPD_4276 [KO:K06287] [EC:3.6.1.-]
BN1229_v1_1066  conserved protein of unknown function [KO:K06287] [EC:3.6.1.-]
BN1229_v1_2967  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
BN1229_v1_1733  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
BN1229_v1_2610  surE; broad specificity 5'(3')-nucleotidase and polyphosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
BN1229_v1_0226  conserved protein of unknown function [KO:K09769] [EC:3.1.4.16]
BN1229_v1_1328  2-deoxycytidine 5-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
BN1229_v1_2567  nrdJ; Vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
BN1229_v1_1595  Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
BN1229_v1_0126  conserved protein of unknown function [KO:K06952] [EC:3.1.3.89]
BN1229_v1_3160  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
BN1229_v1_1202  deoxyuridinetriphosphatase (modular protein) [KO:K01520] [EC:3.6.1.23]
BN1229_v1_4008  thyA; thymidylate synthase (TS) (TSase) [KO:K00560] [EC:2.1.1.45]
BN1229_v1_2215  rutE; oxidoreductase subunit of the alternative pyrimidine degradation pathway [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
fiy00030  Pentose phosphate pathway
fiy00220  Arginine biosynthesis
fiy00250  Alanine, aspartate and glutamate metabolism
fiy00280  Valine, leucine and isoleucine degradation
fiy00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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