KEGG   PATHWAY: geo00010
Entry
geo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Geotalea daltonii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
geo00010  Glycolysis / Gluconeogenesis
geo00010

Module
geo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:geo00010]
geo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:geo00010]
geo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:geo00010]
geo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:geo00010]
Other DBs
GO: 0006096 0006094
Organism
Geotalea daltonii [GN:geo]
Gene
Geob_0080  mtd; mannitol dehydrogenase [KO:K13979] [EC:1.1.1.2]
Geob_0165  [KO:K24012]
Geob_0268  [KO:K13954] [EC:1.1.1.1]
Geob_0375  por; pyruvate:ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.8.1]
Geob_0424  [KO:K00016] [EC:1.1.1.27]
Geob_0612  gpmI; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Geob_1021  pckA; phosphoenolpyruvate carboxykinase, GTP-dependent [KO:K01596] [EC:4.1.1.32]
Geob_1167  gapB; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Geob_1498  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Geob_1578  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Geob_1666  [KO:K01810] [EC:5.3.1.9]
Geob_1850  [KO:K01624] [EC:4.1.2.13]
Geob_1950  lpdA-1; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Geob_1952  pdhA; pyruvate dehydrogenase complex, E1 protein, alpha subunit [KO:K00161] [EC:1.2.4.1]
Geob_1953  pdhB; pyruvate dehydrogenase complex, E1 protein, beta subunit [KO:K00162] [EC:1.2.4.1]
Geob_1954  aceF; pyruvate dehydrogenase complex, E2 protein, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Geob_2516  [KO:K13953] [EC:1.1.1.1]
Geob_2528  [KO:K00134] [EC:1.2.1.12]
Geob_2666  korA; 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Geob_2667  korB; 2-oxoglutarate:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Geob_2765  [KO:K15635] [EC:5.4.2.12]
Geob_2766  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Geob_2879  pfk-1; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Geob_2880  [KO:K25026]
Geob_2897  gapA; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Geob_2898  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Geob_2899  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Geob_3004  vorB; 2-oxoacid:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Geob_3005  vorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Geob_3099  eno; enolase [KO:K01689] [EC:4.2.1.11]
Geob_3464  pfk-2; 6-phosphofructokinase, ATP-dependent [KO:K00850] [EC:2.7.1.11]
Geob_3657  [KO:K00131] [EC:1.2.1.9]
Geob_3759  pfk-3; 6-phosphofructokinase, ATP-dependent [KO:K00850] [EC:2.7.1.11]
Geob_3819  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
geo00020  Citrate cycle (TCA cycle)
geo00030  Pentose phosphate pathway
geo00500  Starch and sucrose metabolism
geo00620  Pyruvate metabolism
geo00640  Propanoate metabolism
geo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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