KEGG   PATHWAY: hhar03430
Entry
hhar03430                   Pathway                                
Name
Mismatch repair - Harpia harpyja (harpy eagle)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
hhar03430  Mismatch repair
hhar03430

Other DBs
GO: 0006298
Organism
Harpia harpyja (harpy eagle) [GN:hhar]
Gene
128134547  PMS2; mismatch repair endonuclease PMS2 [KO:K10858]
128136732  MSH3; DNA mismatch repair protein Msh3 [KO:K08736]
128138766  RFC1; replication factor C subunit 1 isoform X1 [KO:K10754]
128139810  [KO:K08739]
128142636  SSBP1; single-stranded DNA-binding protein, mitochondrial isoform X1 [KO:K03111]
128144326  MLH1; DNA mismatch repair protein Mlh1 isoform X1 [KO:K08734]
128146579  RFC5; replication factor C subunit 5 isoform X1 [KO:K10756]
128148086  RPA3; replication protein A 14 kDa subunit [KO:K10740]
128149056  RFC2; replication factor C subunit 2 [KO:K10755]
128149276  RPA1; replication protein A 70 kDa DNA-binding subunit [KO:K07466]
128149558  RFC4; replication factor C subunit 4 isoform X1 [KO:K10755]
128149934  POLD2; LOW QUALITY PROTEIN: DNA polymerase delta subunit 2 [KO:K02328]
128150102  EXO1; exonuclease 1 [KO:K10746] [EC:3.1.-.-]
128150172  MSH2; DNA mismatch repair protein Msh2 [KO:K08735]
128150375  PCNA; proliferating cell nuclear antigen [KO:K04802]
128150497  MSH6; DNA mismatch repair protein Msh6 isoform X1 [KO:K08737]
128152401  RPA2; replication protein A 32 kDa subunit [KO:K10739]
128152831  POLD4; DNA polymerase delta subunit 4 [KO:K03505]
128153404  POLD3; DNA polymerase delta subunit 3 isoform X1 [KO:K03504]
128153435  RFC3; replication factor C subunit 3 isoform X1 [KO:K10756]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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