Homo sapiens (human): 26871 Help Entry 26871             ncRNA     T01001                                  Symbol RNU1-1, HSD1, HU1-1, RNU1, RNU1A, RNU1A3, RNU1G4, Rnu1a1, U1, U1A1 Name (RefSeq) RNA, U1 small nuclear 1   KO K14276   U1 spliceosomal RNA Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01970   Spliceosome assembly (B complex formation) Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     26871 (RNU1-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     26871 (RNU1-1)   09184 RNA family    03100 Non-coding RNAs [BR:hsa03100]     26871 (RNU1-1) Spliceosome [BR:hsa03041]  Splicing related RNAs   26871 (RNU1-1) Non-coding RNAs [BR:hsa03100]  Small nuclear RNA   Sm-class snRNA    26871 (RNU1-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  26871 HGNC:  10120 Ensembl:  ENSG00000206652 LinkDB All DBs Position 1:complement(16514122..16514285) Genome browser NT seq 164 nt NT seq  +upstreamnt  +downstreamnt atacttacctggcaggggagataccatgatcacgaaggtggttttcccagggcgaggctt atccattgcactccggatgtgctgacccctgcgatttccccaaatgtgggaaactcgact gcataatttgtggtagtgggggactgcgttcgcgctttcccctg

Homo sapiens (human): 6625 Help Entry 6625              CDS       T01001                                  Symbol SNRNP70, RNPU1Z, RPU1, SNRP70, Snp1, U1-70K, U170K, U1AP, U1RNP Name (RefSeq) small nuclear ribonucleoprotein U1 subunit 70   KO K11093   U1 small nuclear ribonucleoprotein 70kDa Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01970   Spliceosome assembly (B complex formation) Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6625 (SNRNP70)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     6625 (SNRNP70) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    U1 snRNP specific factors     6625 (SNRNP70)  Complex B     6625 (SNRNP70) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  U1snRNP70_N RRM_1 RRM_7 RRM_5 Motif Other DBs NCBI-GeneID:  6625 NCBI-ProteinID:  NP_003080 OMIM:  180740 HGNC:  11150 Ensembl:  ENSG00000104852 UniProt:  P08621 Structure PDBPDBj LinkDB All DBs Position 19:49085451..49108604 Genome browser AA seq 437 aa AA seqDB search MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE RRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERAR RERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRS ERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYMESEGG DGYLAPENGYLMEAAPE NT seq 1314 nt NT seq  +upstreamnt  +downstreamnt atgacccagttcctgccgcccaaccttctggccctctttgccccccgtgaccctattcca tacctgccacccctggagaaactgccacatgaaaaacaccacaatcaaccttattgtggc attgcgccgtacattcgagagtttgaggaccctcgagatgcccctcctccaactcgtgct gaaacccgagaggagcgcatggagaggaaaagacgggaaaagattgagcggcgacagcaa gaagtggagacagagcttaaaatgtgggaccctcacaatgatcccaatgctcagggggat gccttcaagactctcttcgtggcgagagtgaattatgacacaacagaatccaagctccgg agagagtttgaggtgtacggacctatcaaaagaatacacatggtctacagtaagcggtca ggaaagccccgtggctatgccttcatcgagtacgaacacgagcgagacatgcactccgct tacaaacacgcagatggcaagaagattgatggcaggagggtccttgtggacgtggagagg ggccgaaccgtgaagggctggaggccccggcggctaggaggaggcctcggtggtaccaga agaggaggggctgatgtgaacatccggcattcaggccgcgatgacacctcccgctacgat gagaggcccggcccctccccgcttccgcacagggaccgggaccgggaccgtgagcgggag cgcagagagcggagccgggagcgagacaaggagcgagaacggcgacgctcccgctcccgg gaccggcggaggcgctcacggagtcgcgacaaggaggagcggaggcgctccagggagcgg agcaaggacaaggaccgggaccggaagcggcgaagcagccggagtcgggagcgggcccgg cgggagcgggagcgcaaggaggagctgcgtggcggcggtggcgacatggcggagccctcc gaggcgggtgacgcgccccctgatgatgggcctccaggggagctcgggcctgacggccct gacggtccagaggaaaagggccgggatcgtgaccgggagcgacggcggagccaccggagc gagcgcgagcggcgccgggaccgggatcgtgaccgtgaccgtgaccgcgagcacaaacgg ggggagcggggcagtgagcggggcagggatgaggcccgaggtgggggcggtggccaggac aacgggctggagggtctgggcaacgacagccgagacatgtacatggagtctgagggcggc gacggctacctggctccggagaatgggtatttgatggaggctgcgccggagtga

Homo sapiens (human): 6626 Help Entry 6626              CDS       T01001                                  Symbol SNRPA, Mud1, U1-A, U1A Name (RefSeq) small nuclear ribonucleoprotein polypeptide A   KO K11091   U1 small nuclear ribonucleoprotein A Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01970   Spliceosome assembly (B complex formation) Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6626 (SNRPA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     6626 (SNRPA) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    U1 snRNP specific factors     6626 (SNRPA)  Complex B     6626 (SNRPA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RRM_1 RRM_occluded RRM_5 DUF4523 Motif Other DBs NCBI-GeneID:  6626 NCBI-ProteinID:  NP_004587 OMIM:  182285 HGNC:  11151 Ensembl:  ENSG00000077312 UniProt:  P09012 Structure PDBPDBj LinkDB All DBs Position 19:40751203..40765389 Genome browser AA seq 282 aa AA seqDB search MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA TKKAVQGGGATPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQI PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK NT seq 849 nt NT seq  +upstreamnt  +downstreamnt atggcagttcccgagacccgccctaaccacactatttatatcaacaacctcaatgagaag atcaagaaggatgagctaaaaaagtccctgtacgccatcttctcccagtttggccagatc ctggatatcctggtatcacggagcctgaagatgaggggccaggcctttgtcatcttcaag gaggtcagcagcgccaccaacgccctgcgctccatgcagggtttccctttctatgacaaa cctatgcgtatccagtatgccaagaccgactcagatatcattgccaagatgaaaggcacc ttcgtggagcgggaccgcaagcgggagaagaggaagcccaagagccaggagaccccggcc accaagaaggctgtgcaaggcgggggagccacccccgtggtgggggctgtccaggggcct gtcccgggcatgccgccgatgactcaggcgccccgcattatgcaccacatgccgggccag ccgccctacatgccgccccctggtatgatccccccgccaggccttgcacctggccagatc ccaccaggggccatgcccccgcagcagcttatgccaggacagatgccccctgcccagcct ctttctgagaatccaccgaatcacatcttgttcctcaccaacctgccagaggagaccaac gagctcatgctgtccatgcttttcaatcagttccctggcttcaaggaggtccgtctggta cccgggcggcatgacatcgccttcgtggagtttgacaatgaggtacaggcaggggcagct cgcgatgccctgcagggctttaagatcacgcagaacaacgccatgaagatctcctttgcc aagaagtag

Homo sapiens (human): 6631 Help Entry 6631              CDS       T01001                                  Symbol SNRPC, U1C, Yhc1 Name (RefSeq) small nuclear ribonucleoprotein polypeptide C   KO K11095   U1 small nuclear ribonucleoprotein C Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01970   Spliceosome assembly (B complex formation) Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6631 (SNRPC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     6631 (SNRPC) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    U1 snRNP specific factors     6631 (SNRPC)  Complex B     6631 (SNRPC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-U1 Motif Other DBs NCBI-GeneID:  6631 NCBI-ProteinID:  NP_003084 OMIM:  603522 HGNC:  11157 Ensembl:  ENSG00000124562 UniProt:  P09234 Q5TAL4 Structure PDBPDBj LinkDB All DBs Position 6:34757505..34773857 Genome browser AA seq 159 aa AA seqDB search MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG KIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAP GMRPPMGGHMPMMPGPPMMRPPARPMMVPTRPGMTRPDR NT seq 480 nt NT seq  +upstreamnt  +downstreamnt atgcccaagttttattgtgactactgcgatacatacctcacccatgactctccatctgtg agaaagacacactgcagtggaaggaaacacaaagagaatgtgaaagactattatcagaaa tggatggaagagcaggctcagagcctgattgacaaaacaacggctgcatttcaacaagga aagatacctcctactccattctctgctcctcctcctgcaggggcgatgataccacctccc cccagccttccgggtcctcctcgccctggtatgatgccagcaccccatatggggggccct cccatgatgccaatgatgggccctcctcctcctgggatgatgccagtgggacctgctcct ggaatgaggccgcccatgggaggccatatgccaatgatgcctgggcccccaatgatgaga cctcctgcccgtcccatgatggtgcccactcggcccggaatgactcgaccagacagataa

Homo sapiens (human): 6628 Help Entry 6628              CDS       T01001                                  Symbol SNRPB, CCMS, COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB', snRNP-B Name (RefSeq) small nuclear ribonucleoprotein polypeptides B and B1   KO K11086   small nuclear ribonucleoprotein B and B' Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome hsa05322   Systemic lupus erythematosus Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Disease H01843   Cerebrocostomandibular syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6628 (SNRPB)  09160 Human Diseases   09163 Immune disease    05322 Systemic lupus erythematosus     6628 (SNRPB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsa03019]     6628 (SNRPB)    03041 Spliceosome [BR:hsa03041]     6628 (SNRPB)    03032 DNA replication proteins [BR:hsa03032]     6628 (SNRPB) Messenger RNA biogenesis [BR:hsa03019]  Eukaryotic type   mRNA processing factors    3' end processing     U7-dependent histone pre-mRNA processing factors      6628 (SNRPB) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6628 (SNRPB)   U2 snRNP components     6628 (SNRPB)  Complex B   U1 snRNP components     6628 (SNRPB)   U4/U6.U5 tri-snRNP components     6628 (SNRPB)  Complex C   U2 snRNP components     6628 (SNRPB) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6628 (SNRPB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM SM-ATX Motif Other DBs NCBI-GeneID:  6628 NCBI-ProteinID:  NP_937859 OMIM:  182282 HGNC:  11153 Ensembl:  ENSG00000125835 UniProt:  P14678 Structure PDBPDBj LinkDB All DBs Position 20:complement(2461642..2470789) Genome browser AA seq 240 aa AA seqDB search MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAE REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPM PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMG RGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPRP NT seq 723 nt NT seq  +upstreamnt  +downstreamnt atgacggtgggcaagagcagcaagatgctgcagcatattgattacaggatgaggtgcatc ctgcaggacggccggatcttcattggcaccttcaaggcttttgacaagcacatgaatttg atcctctgtgactgtgatgagttcagaaagatcaagccaaagaactccaaacaagcagaa agggaagagaagcgagtcctcggtctggtgctgctgcgaggggagaatctggtctcaatg acagtagagggacctcctcccaaagatactggtattgctcgagttccacttgctggagct gccgggggcccagggatcggcagggctgctggcagaggaatcccagctggggttcccatg ccccaggctcctgcaggacttgctgggccagtccgtggggttggcgggccatcccaacag gtgatgaccccacaaggaagaggtactgttgcagccgctgcagctgctgccacagccagt attgccggggctccaacccagtacccacctggccgtgggggtcctcccccacctatgggc cgaggagcaccccctccaggcatgatgggcccacctcctggtatgagacctcctatgggt cccccaatggggatcccccctggaagagggactccaatgggcatgccccctccgggaatg cggcctcctccccctgggatgcgagggccccctcccccgggaatgcgcccaccaaggccc tag

Homo sapiens (human): 6634 Help Entry 6634              CDS       T01001                                  Symbol SNRPD3, SMD3, Sm-D3 Name (RefSeq) small nuclear ribonucleoprotein D3 polypeptide   KO K11088   small nuclear ribonucleoprotein D3 Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome hsa05322   Systemic lupus erythematosus Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6634 (SNRPD3)  09160 Human Diseases   09163 Immune disease    05322 Systemic lupus erythematosus     6634 (SNRPD3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsa03019]     6634 (SNRPD3)    03041 Spliceosome [BR:hsa03041]     6634 (SNRPD3)    03032 DNA replication proteins [BR:hsa03032]     6634 (SNRPD3) Messenger RNA biogenesis [BR:hsa03019]  Eukaryotic type   mRNA processing factors    3' end processing     U7-dependent histone pre-mRNA processing factors      6634 (SNRPD3) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6634 (SNRPD3)   U2 snRNP components     6634 (SNRPD3)  Complex B   U1 snRNP components     6634 (SNRPD3)   U4/U6.U5 tri-snRNP components     6634 (SNRPD3)  Complex C   U2 snRNP components     6634 (SNRPD3) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6634 (SNRPD3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM Kringle Motif Other DBs NCBI-GeneID:  6634 NCBI-ProteinID:  NP_001265585 OMIM:  601062 HGNC:  11160 Ensembl:  ENSG00000100028 UniProt:  P62318 Structure PDBPDBj LinkDB All DBs Position 22:24555650..24574971 Genome browser AA seq 126 aa AA seqDB search MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGN IFQKRR NT seq 381 nt NT seq  +upstreamnt  +downstreamnt atgtctattggtgtgccgattaaagtactgcatgaggccgagggccacattgtgacatgt gagacgaacaccggtgaggtatatcgggggaagctcattgaagcagaggacaacatgaac tgccagatgtccaacatcacagtcacatacagagatggccgagtggcacagctggagcag gtatacatccgtggcagcaaaatccgctttctgattttgcctgacatgctgaagaacgca cccatgttaaagagcatgaaaaataaaaaccaaggctcaggggctggccgaggaaaagct gctattctcaaggcccaagtggccgcaagaggaagaggacgtggaatgggacgtggaaac atctttcaaaagcgaagataa

Homo sapiens (human): 6632 Help Entry 6632              CDS       T01001                                  Symbol SNRPD1, HsT2456, SMD1, SNRPD, Sm-D1 Name (RefSeq) small nuclear ribonucleoprotein D1 polypeptide   KO K11087   small nuclear ribonucleoprotein D1 Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome hsa05322   Systemic lupus erythematosus Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6632 (SNRPD1)  09160 Human Diseases   09163 Immune disease    05322 Systemic lupus erythematosus     6632 (SNRPD1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     6632 (SNRPD1)    03032 DNA replication proteins [BR:hsa03032]     6632 (SNRPD1) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6632 (SNRPD1)   U2 snRNP components     6632 (SNRPD1)  Complex B   U1 snRNP components     6632 (SNRPD1)   U4/U6.U5 tri-snRNP components     6632 (SNRPD1)  Complex C   U2 snRNP components     6632 (SNRPD1) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6632 (SNRPD1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM EBNA2_Core Gemin7 Hfq Phage_Hfq SM-ATX API5 Motif Other DBs NCBI-GeneID:  6632 NCBI-ProteinID:  NP_008869 OMIM:  601063 HGNC:  11158 Ensembl:  ENSG00000167088 UniProt:  P62314 Structure PDBPDBj LinkDB All DBs Position 18:21612314..21633520 Genome browser AA seq 119 aa AA seqDB search MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR NT seq 360 nt NT seq  +upstreamnt  +downstreamnt atgaagctcgtgagatttttgatgaaattgagtcatgaaactgtaaccattgaattgaag aacggaacacaggtccatggaacaatcacaggtgtggatgtcagcatgaatacacatctt aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacgctgagtatt cgaggaaataacattcggtattttattctaccagacagtttacctctggatacactactt gtggatgttgaacctaaggtgaaatctaagaaaagggaagctgttgcaggaagaggcaga ggaagaggaagaggaagaggacgtggccgtggcagaggaagagggggtcctaggcgataa

Homo sapiens (human): 6633 Help Entry 6633              CDS       T01001                                  Symbol SNRPD2, SMD2, SNRPD1, Sm-D2 Name (RefSeq) small nuclear ribonucleoprotein D2 polypeptide   KO K11096   small nuclear ribonucleoprotein D2 Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6633 (SNRPD2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     6633 (SNRPD2)    03032 DNA replication proteins [BR:hsa03032]     6633 (SNRPD2) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6633 (SNRPD2)   U2 snRNP components     6633 (SNRPD2)  Complex B   U1 snRNP components     6633 (SNRPD2)   U4/U6.U5 tri-snRNP components     6633 (SNRPD2)  Complex C   U2 snRNP components     6633 (SNRPD2) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6633 (SNRPD2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM Hfq GIT1_C Ldh_1_C Motif Other DBs NCBI-GeneID:  6633 NCBI-ProteinID:  NP_001371576 OMIM:  601061 HGNC:  11159 Ensembl:  ENSG00000125743 UniProt:  P62316 Structure PDBPDBj LinkDB All DBs Position 19:complement(45687454..45692316) Genome browser AA seq 118 aa AA seqDB search MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK NT seq 357 nt NT seq  +upstreamnt  +downstreamnt atgagcctcctcaacaagcccaagagtgagatgaccccagaggagctgcagaagcgagag gaggaggaatttaacaccggtccactctctgtgctcacacagtcagtcaagaacaatacc caagtgctcatcaactgccgcaacaataagaaactcctgggccgcgtgaaggccttcgat aggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagt ggcaagggcaagaagaagtccaagccagtcaacaaagaccgctacatctccaagatgttc ctgcgcggggactcagtcatcgtggtcctgcggaacccgctcatcgccggcaagtag

Homo sapiens (human): 6635 Help Entry 6635              CDS       T01001                                  Symbol SNRPE, HYPT11, SME, Sm-E, snRNP-E Name (RefSeq) small nuclear ribonucleoprotein polypeptide E   KO K11097   small nuclear ribonucleoprotein E Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Disease H00786   Hypotrichosis Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6635 (SNRPE)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsa03019]     6635 (SNRPE)    03041 Spliceosome [BR:hsa03041]     6635 (SNRPE)    03032 DNA replication proteins [BR:hsa03032]     6635 (SNRPE) Messenger RNA biogenesis [BR:hsa03019]  Eukaryotic type   mRNA processing factors    3' end processing     U7-dependent histone pre-mRNA processing factors      6635 (SNRPE) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6635 (SNRPE)   U2 snRNP components     6635 (SNRPE)  Complex B   U1 snRNP components     6635 (SNRPE)   U4/U6.U5 tri-snRNP components     6635 (SNRPE)  Complex C   U2 snRNP components     6635 (SNRPE) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6635 (SNRPE) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM Hfq Motif Other DBs NCBI-GeneID:  6635 NCBI-ProteinID:  NP_003085 OMIM:  128260 HGNC:  11161 Ensembl:  ENSG00000182004 UniProt:  P62304 Structure PDBPDBj LinkDB All DBs Position 1:203861599..203871152 Genome browser AA seq 92 aa AA seqDB search MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN NT seq 279 nt NT seq  +upstreamnt  +downstreamnt atggcgtaccgtggccagggtcagaaagtgcagaaggttatggtgcagcccatcaacctc atcttcagatacttacaaaatagatcgcggattcaggtgtggctctatgagcaagtgaat atgcggatagaaggctgtatcattggttttgatgagtatatgaaccttgtattagatgat gcagaagagattcattctaaaacaaagtcaagaaaacaactgggtcggatcatgctaaaa ggagataatattactctgctacaaagtgtctccaactag

Homo sapiens (human): 6636 Help Entry 6636              CDS       T01001                                  Symbol SNRPF, SMF, Sm-F, snRNP-F Name (RefSeq) small nuclear ribonucleoprotein polypeptide F   KO K11098   small nuclear ribonucleoprotein F Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01963   Sm core assembly and 3 end processing of pre U1 snRNA N01964   pre U1 snRNP import and U1 snRNP formation N01968   Spliceosome assembly (E and A complex formation) N01969   U4/U6-U5 snRNP fomation N01970   Spliceosome assembly (B complex formation) N01971   spliceosome activation N01972   Spliceosome catalysis (branching) N01993   Spliceosome catalysis (exon ligation) N01994   Spliceosome disassembly Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6636 (SNRPF)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsa03019]     6636 (SNRPF)    03041 Spliceosome [BR:hsa03041]     6636 (SNRPF)    03032 DNA replication proteins [BR:hsa03032]     6636 (SNRPF) Messenger RNA biogenesis [BR:hsa03019]  Eukaryotic type   mRNA processing factors    3' end processing     U7-dependent histone pre-mRNA processing factors      6636 (SNRPF) Spliceosome [BR:hsa03041]  Complex A   U1 snRNP components    Sm proteins     6636 (SNRPF)   U2 snRNP components     6636 (SNRPF)  Complex B   U1 snRNP components     6636 (SNRPF)   U4/U6.U5 tri-snRNP components     6636 (SNRPF)  Complex C   U2 snRNP components     6636 (SNRPF) DNA replication proteins [BR:hsa03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (fungi)     Sm core complex      6636 (SNRPF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LSM SM-ATX Motif Other DBs NCBI-GeneID:  6636 NCBI-ProteinID:  NP_003086 OMIM:  603541 HGNC:  11162 Ensembl:  ENSG00000139343 UniProt:  P62306 Structure PDBPDBj LinkDB All DBs Position 12:95858952..95866140 Genome browser AA seq 86 aa AA seqDB search MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG EVLIRCNNVLYIRGVEEEEEDGEMRE NT seq 261 nt NT seq  +upstreamnt  +downstreamnt atgagtttacccctcaatcccaaacctttcctcaatggactaacaggaaagccagtgatg gtgaaacttaagtggggaatggagtacaagggctatctggtatctgtagatggctacatg aacatgcagcttgcaaatacagaagaatacatagatggagctttgtctggacatctgggt gaagttttaataaggtgtaataatgtcctttatatcagaggtgtggaagaagaggaagaa gatggggaaatgagagaatag

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