KEGG   Homo sapiens (human): 3987
Entry
3987              CDS       T01001                                 
Symbol
LIMS1, PINCH, PINCH-1, PINCH1
Name
(RefSeq) LIM zinc finger domain containing 1
  KO
K23354  LIM and senescent cell antigen-like-containing domain protein 1/2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04518  Integrin signaling
Network
nt06548  Integrin signaling
  Element
N01921  Integrin alpha4beta1 signaling
N01973  Integrin alpha4beta7 signaling
N01974  Integrin alpha9beta1 signaling
N01975  Integrin alphaLbeta2 signaling
N01976  Integrin alphaMbeta2 signaling
N01977  Integrin alphaDbeta2 signaling
N01978  Integrin alphaEbeta2 signaling
N01979  Integrin alphaIIbbeta3 signaling
N01980  Integrin alpha5beta1 signaling
N01981  Integrin alpha8beta1 signaling
N01982  Integrin alphaVbeta1 signaling
N01983  Integrin alphaVbeta3 signaling
N01984  Integrin alphaVbeta5 signaling
N01985  Integrin alphaVbeta6 signaling
N01986  Integrin alphaVbeta8 signaling
N01987  Integrin alpha1beta1 signaling
N01988  Integrin alpha2beta1 signaling
N01989  Integrin alpha10beta1 signaling
N01990  Integrin alpha3beta1 signaling
N01991  Integrin alpha6beta1 signaling
N01992  Integrin alpha6beta4 signaling
N01996  Integrin alpha11beta1 signaling
N01997  Integrin alpha7beta1 signaling
N01998  Integrin alphaXbeta2 signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    3987 (LIMS1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    3987 (LIMS1)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  PINCH family proteins
   3987 (LIMS1)
SSDB
Motif
Pfam: LIM DUF7685 DUF7479 Zn_ribbon_RRN7 NinF
Other DBs
NCBI-GeneID: 3987
NCBI-ProteinID: NP_001180417
OMIM: 602567
HGNC: 6616
Ensembl: ENSG00000169756
UniProt: P48059
Structure
LinkDB
Position
2:108533671..108687246
AA seq 325 aa
MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE
HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP
CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY
CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC
ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC
KKCYEKFPLELKKRLKKLAETLGRK
NT seq 978 nt   +upstreamnt  +downstreamnt
atggccaacgccctggccagcgccacttgcgagcgctgcaagggcggctttgcgcccgct
gagaagatcgtgaacagtaatggggagctgtaccatgagcagtgtttcgtgtgcgctcag
tgcttccagcagttcccagaaggactcttctatgagtttgaaggaagaaagtactgtgaa
catgactttcagatgctctttgccccttgctgtcatcagtgtggtgaattcatcattggc
cgagttatcaaagccatgaataacagctggcatccggagtgcttccgctgtgacctctgc
caggaagttctggcagatatcgggtttgtcaagaatgctgggagacacctgtgtcgcccc
tgtcataatcgtgagaaagccagaggccttgggaaatacatctgccagaaatgccatgct
atcatcgatgagcagcctctgatattcaagaacgacccctaccatccagaccatttcaac
tgcgccaactgcgggaaggagctgactgccgatgcacgggagctgaaaggggagctatac
tgcctcccatgccatgataaaatgggggtccccatctgtggtgcttgccgacggcccatc
gaagggcgcgtggtgaacgctatgggcaagcagtggcatgtggagcattttgtttgtgcc
aagtgtgagaaaccctttcttggacatcgccattatgagaggaaaggcctggcatattgt
gaaactcactataaccagctatttggtgatgtttgcttccactgcaatcgtgttatagaa
ggtgatgtggtctctgctcttaataaggcctggtgcgtgaactgctttgcctgttctacc
tgcaacactaaattaacactcaagaataagtttgtggagtttgacatgaagccagtctgt
aagaagtgctatgagaaatttccattggagctgaagaaaagacttaagaaactagctgag
accttaggaaggaaataa

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