KEGG   Homo sapiens (human): 6628
Entry
6628              CDS       T01001                                 
Symbol
SNRPB, CCMS, COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB', snRNP-B
Name
(RefSeq) small nuclear ribonucleoprotein polypeptides B and B1
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa05322  Systemic lupus erythematosus
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Disease
H01843  Cerebrocostomandibular syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6628 (SNRPB)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    6628 (SNRPB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6628 (SNRPB)
   03041 Spliceosome [BR:hsa03041]
    6628 (SNRPB)
   03032 DNA replication proteins [BR:hsa03032]
    6628 (SNRPB)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6628 (SNRPB)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6628 (SNRPB)
  U2 snRNP components
    6628 (SNRPB)
 Complex B
  U1 snRNP components
    6628 (SNRPB)
  U4/U6.U5 tri-snRNP components
    6628 (SNRPB)
 Complex C
  U2 snRNP components
    6628 (SNRPB)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6628 (SNRPB)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 6628
NCBI-ProteinID: NP_937859
OMIM: 182282
HGNC: 11153
Ensembl: ENSG00000125835
UniProt: P14678
Structure
LinkDB
Position
20:complement(2461642..2470789)
AA seq 240 aa
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMG
RGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq 723 nt   +upstreamnt  +downstreamnt
atgacggtgggcaagagcagcaagatgctgcagcatattgattacaggatgaggtgcatc
ctgcaggacggccggatcttcattggcaccttcaaggcttttgacaagcacatgaatttg
atcctctgtgactgtgatgagttcagaaagatcaagccaaagaactccaaacaagcagaa
agggaagagaagcgagtcctcggtctggtgctgctgcgaggggagaatctggtctcaatg
acagtagagggacctcctcccaaagatactggtattgctcgagttccacttgctggagct
gccgggggcccagggatcggcagggctgctggcagaggaatcccagctggggttcccatg
ccccaggctcctgcaggacttgctgggccagtccgtggggttggcgggccatcccaacag
gtgatgaccccacaaggaagaggtactgttgcagccgctgcagctgctgccacagccagt
attgccggggctccaacccagtacccacctggccgtgggggtcctcccccacctatgggc
cgaggagcaccccctccaggcatgatgggcccacctcctggtatgagacctcctatgggt
cccccaatggggatcccccctggaagagggactccaatgggcatgccccctccgggaatg
cggcctcctccccctgggatgcgagggccccctcccccgggaatgcgcccaccaaggccc
tag

KEGG   Homo sapiens (human): 6634
Entry
6634              CDS       T01001                                 
Symbol
SNRPD3, SMD3, Sm-D3
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa05322  Systemic lupus erythematosus
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6634 (SNRPD3)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    6634 (SNRPD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6634 (SNRPD3)
   03041 Spliceosome [BR:hsa03041]
    6634 (SNRPD3)
   03032 DNA replication proteins [BR:hsa03032]
    6634 (SNRPD3)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6634 (SNRPD3)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6634 (SNRPD3)
  U2 snRNP components
    6634 (SNRPD3)
 Complex B
  U1 snRNP components
    6634 (SNRPD3)
  U4/U6.U5 tri-snRNP components
    6634 (SNRPD3)
 Complex C
  U2 snRNP components
    6634 (SNRPD3)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6634 (SNRPD3)
SSDB
Motif
Pfam: LSM Kringle
Other DBs
NCBI-GeneID: 6634
NCBI-ProteinID: NP_001265585
OMIM: 601062
HGNC: 11160
Ensembl: ENSG00000100028
UniProt: P62318
Structure
LinkDB
Position
22:24555650..24574971
AA seq 126 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGN
IFQKRR
NT seq 381 nt   +upstreamnt  +downstreamnt
atgtctattggtgtgccgattaaagtactgcatgaggccgagggccacattgtgacatgt
gagacgaacaccggtgaggtatatcgggggaagctcattgaagcagaggacaacatgaac
tgccagatgtccaacatcacagtcacatacagagatggccgagtggcacagctggagcag
gtatacatccgtggcagcaaaatccgctttctgattttgcctgacatgctgaagaacgca
cccatgttaaagagcatgaaaaataaaaaccaaggctcaggggctggccgaggaaaagct
gctattctcaaggcccaagtggccgcaagaggaagaggacgtggaatgggacgtggaaac
atctttcaaaagcgaagataa

KEGG   Homo sapiens (human): 6632
Entry
6632              CDS       T01001                                 
Symbol
SNRPD1, HsT2456, SMD1, SNRPD, Sm-D1
Name
(RefSeq) small nuclear ribonucleoprotein D1 polypeptide
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa05322  Systemic lupus erythematosus
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6632 (SNRPD1)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    6632 (SNRPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    6632 (SNRPD1)
   03032 DNA replication proteins [BR:hsa03032]
    6632 (SNRPD1)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6632 (SNRPD1)
  U2 snRNP components
    6632 (SNRPD1)
 Complex B
  U1 snRNP components
    6632 (SNRPD1)
  U4/U6.U5 tri-snRNP components
    6632 (SNRPD1)
 Complex C
  U2 snRNP components
    6632 (SNRPD1)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6632 (SNRPD1)
SSDB
Motif
Pfam: LSM EBNA2_Core Gemin7 Hfq Phage_Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 6632
NCBI-ProteinID: NP_008869
OMIM: 601063
HGNC: 11158
Ensembl: ENSG00000167088
UniProt: P62314
Structure
LinkDB
Position
18:21612314..21633520
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagatttttgatgaaattgagtcatgaaactgtaaccattgaattgaag
aacggaacacaggtccatggaacaatcacaggtgtggatgtcagcatgaatacacatctt
aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacgctgagtatt
cgaggaaataacattcggtattttattctaccagacagtttacctctggatacactactt
gtggatgttgaacctaaggtgaaatctaagaaaagggaagctgttgcaggaagaggcaga
ggaagaggaagaggaagaggacgtggccgtggcagaggaagagggggtcctaggcgataa

KEGG   Homo sapiens (human): 6633
Entry
6633              CDS       T01001                                 
Symbol
SNRPD2, SMD2, SNRPD1, Sm-D2
Name
(RefSeq) small nuclear ribonucleoprotein D2 polypeptide
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6633 (SNRPD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    6633 (SNRPD2)
   03032 DNA replication proteins [BR:hsa03032]
    6633 (SNRPD2)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6633 (SNRPD2)
  U2 snRNP components
    6633 (SNRPD2)
 Complex B
  U1 snRNP components
    6633 (SNRPD2)
  U4/U6.U5 tri-snRNP components
    6633 (SNRPD2)
 Complex C
  U2 snRNP components
    6633 (SNRPD2)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6633 (SNRPD2)
SSDB
Motif
Pfam: LSM Hfq GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 6633
NCBI-ProteinID: NP_001371576
OMIM: 601061
HGNC: 11159
Ensembl: ENSG00000125743
UniProt: P62316
Structure
LinkDB
Position
19:complement(45687454..45692316)
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagcctcctcaacaagcccaagagtgagatgaccccagaggagctgcagaagcgagag
gaggaggaatttaacaccggtccactctctgtgctcacacagtcagtcaagaacaatacc
caagtgctcatcaactgccgcaacaataagaaactcctgggccgcgtgaaggccttcgat
aggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagt
ggcaagggcaagaagaagtccaagccagtcaacaaagaccgctacatctccaagatgttc
ctgcgcggggactcagtcatcgtggtcctgcggaacccgctcatcgccggcaagtag

KEGG   Homo sapiens (human): 6635
Entry
6635              CDS       T01001                                 
Symbol
SNRPE, HYPT11, SME, Sm-E, snRNP-E
Name
(RefSeq) small nuclear ribonucleoprotein polypeptide E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Disease
H00786  Hypotrichosis
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6635 (SNRPE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6635 (SNRPE)
   03041 Spliceosome [BR:hsa03041]
    6635 (SNRPE)
   03032 DNA replication proteins [BR:hsa03032]
    6635 (SNRPE)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6635 (SNRPE)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6635 (SNRPE)
  U2 snRNP components
    6635 (SNRPE)
 Complex B
  U1 snRNP components
    6635 (SNRPE)
  U4/U6.U5 tri-snRNP components
    6635 (SNRPE)
 Complex C
  U2 snRNP components
    6635 (SNRPE)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6635 (SNRPE)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 6635
NCBI-ProteinID: NP_003085
OMIM: 128260
HGNC: 11161
Ensembl: ENSG00000182004
UniProt: P62304
Structure
LinkDB
Position
1:203861599..203871152
AA seq 92 aa
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcgtaccgtggccagggtcagaaagtgcagaaggttatggtgcagcccatcaacctc
atcttcagatacttacaaaatagatcgcggattcaggtgtggctctatgagcaagtgaat
atgcggatagaaggctgtatcattggttttgatgagtatatgaaccttgtattagatgat
gcagaagagattcattctaaaacaaagtcaagaaaacaactgggtcggatcatgctaaaa
ggagataatattactctgctacaaagtgtctccaactag

KEGG   Homo sapiens (human): 6636
Entry
6636              CDS       T01001                                 
Symbol
SNRPF, SMF, Sm-F, snRNP-F
Name
(RefSeq) small nuclear ribonucleoprotein polypeptide F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6636 (SNRPF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6636 (SNRPF)
   03041 Spliceosome [BR:hsa03041]
    6636 (SNRPF)
   03032 DNA replication proteins [BR:hsa03032]
    6636 (SNRPF)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6636 (SNRPF)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6636 (SNRPF)
  U2 snRNP components
    6636 (SNRPF)
 Complex B
  U1 snRNP components
    6636 (SNRPF)
  U4/U6.U5 tri-snRNP components
    6636 (SNRPF)
 Complex C
  U2 snRNP components
    6636 (SNRPF)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6636 (SNRPF)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 6636
NCBI-ProteinID: NP_003086
OMIM: 603541
HGNC: 11162
Ensembl: ENSG00000139343
UniProt: P62306
Structure
LinkDB
Position
12:95858952..95866140
AA seq 86 aa
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagtttacccctcaatcccaaacctttcctcaatggactaacaggaaagccagtgatg
gtgaaacttaagtggggaatggagtacaagggctatctggtatctgtagatggctacatg
aacatgcagcttgcaaatacagaagaatacatagatggagctttgtctggacatctgggt
gaagttttaataaggtgtaataatgtcctttatatcagaggtgtggaagaagaggaagaa
gatggggaaatgagagaatag

KEGG   Homo sapiens (human): 6637
Entry
6637              CDS       T01001                                 
Symbol
SNRPG, SMG, Sm-G
Name
(RefSeq) small nuclear ribonucleoprotein polypeptide G
  KO
K11099  small nuclear ribonucleoprotein G
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6637 (SNRPG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6637 (SNRPG)
   03041 Spliceosome [BR:hsa03041]
    6637 (SNRPG)
   03032 DNA replication proteins [BR:hsa03032]
    6637 (SNRPG)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6637 (SNRPG)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6637 (SNRPG)
  U2 snRNP components
    6637 (SNRPG)
 Complex B
  U1 snRNP components
    6637 (SNRPG)
  U4/U6.U5 tri-snRNP components
    6637 (SNRPG)
 Complex C
  U2 snRNP components
    6637 (SNRPG)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6637 (SNRPG)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 6637
NCBI-ProteinID: NP_003087
OMIM: 603542
HGNC: 11163
Ensembl: ENSG00000143977
UniProt: P62308
Structure
LinkDB
Position
2:complement(70281362..70293740)
AA seq 76 aa
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV
VIRGNSIIMLEALERV
NT seq 231 nt   +upstreamnt  +downstreamnt
atgagcaaagctcaccctcccgagttgaaaaaatttatggacaagaagttatcattgaaa
ttaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaacctt
gtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtg
gtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataa

DBGET integrated database retrieval system