KEGG   Homo sapiens (human): 7012
Entry
7012              ncRNA     T01001                                 
Symbol
TERC, DKCA1, PFBMFT2, SCARNA19, TER, TR, TRC3, hTR
Name
(RefSeq) telomerase RNA component
  KO
K22183  telomerase RNA component
Organism
hsa  Homo sapiens (human)
Pathway
hsa05200  Pathways in cancer
hsa05225  Hepatocellular carcinoma
hsa05226  Gastric cancer
Network
nt06232  Telomerase activity (cancer)
nt06261  Gastric cancer
nt06263  Hepatocellular carcinoma
nt06510  Telomere length regulation
  Element
N00239  Telomerase activity
N00240  TERT-overexpression to telomerase activity
N01475  Telomerase RNA maturation
N01476  Assembly and trafficking of telomerase
N01477  Telomere elongation
Disease
H00507  Dyskeratosis congenita
H01132  Aplastic anemia
H01299  Idiopathic pulmonary fibrosis
H02569  Pulmonary fibrosis and/or bone marrow failure, telomere-related
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    7012 (TERC)
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    7012 (TERC)
   05226 Gastric cancer
    7012 (TERC)
 09180 Brite Hierarchies
  09184 RNA family
   03100 Non-coding RNAs [BR:hsa03100]
    7012 (TERC)
Non-coding RNAs [BR:hsa03100]
 Other eukaryotic RNA
  Unclassified
   7012 (TERC)
SSDB
Other DBs
NCBI-GeneID: 7012
OMIM: 602322
HGNC: 11727
Ensembl: ENSG00000277925
LinkDB
Position
3:complement(169764610..169765060)
NT seq 451 nt   +upstreamnt  +downstreamnt
gggttgcggagggtgggcctgggaggggtggtggccattttttgtctaaccctaactgag
aagggcgtaggcgccgtgcttttgctccccgcgcgctgtttttctcgctgactttcagcg
ggcggaaaagcctcggcctgccgccttccaccgttcattctagagcaaacaaaaaatgtc
agctgctggcccgttcgcccctcccggggacctgcggcgggtcgcctgcccagcccccga
accccgcctggaggccgcggtcggcccggggcttctccggaggcacccactgccaccgcg
aagagttgggctctgtcagccgcgggtctctcgggggcgagggcgaggttcaggcctttc
aggccgcaggaagaggaacggagcgagtccccgcgcgcggcgcgattccctgagctgtgg
gacgtgcacccaggactcggctcacacatgc

KEGG   Homo sapiens (human): 96764
Entry
96764             CDS       T01001                                 
Symbol
TGS1, NCOA6IP, PIMT, PIPMT
Name
(RefSeq) trimethylguanosine synthase 1
  KO
K14292  trimethylguanosine synthase [EC:2.1.1.-]
Organism
hsa  Homo sapiens (human)
Network
nt06510  Telomere length regulation
  Element
N01475  Telomerase RNA maturation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    96764 (TGS1)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    96764 (TGS1)
SSDB
Motif
Pfam: Methyltransf_15 Methyltransf_31 Methyltransf_25 TRM5-TYW2_MTfase UPF0020 Methyltransf_11 Cons_hypoth95 Methyltransf_12 PrmA Methyltransf_3
Other DBs
NCBI-GeneID: 96764
NCBI-ProteinID: NP_079107
OMIM: 606461
HGNC: 17843
Ensembl: ENSG00000137574
UniProt: Q96RS0
Structure
LinkDB
Position
8:55773446..55826445
AA seq 853 aa
MCCEKWSRVAEMFLFIEEREDCKILCLCSRAFVEDRKLYNLGLKGYYIRDSGNNSGDQAT
EEEEGGYSCGTAESHDSKGIGLDESELDSEAELMRSMGLPLQFGRITAHKDFEVSMNTRN
KVKIKKKKHQKKYLDEIVQESWRKEYEEDDILASDDPSSIEQYENTRTYELQSKKDTETE
NPPVENTLSPKLEITEKWEKYWNEYGGGLLWQSWQEKHPGQALSSEPWNFPDTKEEWEQH
YSQLYWYYLEQFQYWEAQGWTFDASQSCDTDTYTSKTEADDKNDEKCMKVDLVSFPSSPI
MVDNDSSGTSDKDHSEILDGISNIKLNSEEVTQSQLDSCTSHDGHQQLSEVSSKRECPAS
GQSEPRNGGTNEESNSSGNTNTDPPAEDSQKSSGANTSKDRPHASGTDGDESEEDPPEHK
PSKLKRSHELDIDENPASDFDDSGSLLGFKYGSGQKYGGIPNFSHRQVRYLEKNVKLKSK
YLDMRRQIKMKNKHIFFTKESEKPFFKKSKILSKVEKFLTWVNKPMDEEASQESSSHDNV
HDASTSSDSEEQDMSVKKGDDLLETNNPEPEKCQSVSSAGELETENYERDSLLATVPDEQ
DCVTQEVPDSRQAETEAEVKKKKNKKKNKKVNGLPPEIAAVPELAKYWAQRYRLFSRFDD
GIKLDREGWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDI
DPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIR
TMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNNKLKTITA
YFGDLIRRPASET
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgtgctgcgagaagtggagccgcgtggcggaaatgtttctcttcattgaggagcgggag
gattgtaagatactgtgcctttgctccagggcatttgtggaggatcgaaaattgtacaat
ttgggattaaaaggctattacatcagagacagtggcaacaattcaggagaccaggcgaca
gaagaagaggaaggtggttattcctgtggtactgcagaatcacatgacagcaaaggcata
ggcctggatgaaagtgaacttgattctgaggctgaactcatgagaagtatgggattgcca
cttcaatttggtaggataactgcacataaggattttgaggtatctatgaatactagaaat
aaagttaaaataaaaaagaaaaaacatcaaaagaaatacttagatgaaattgtgcaagaa
tcttggagaaaagaatatgaagaagacgacattttggcttcagatgatccatcttcaatt
gaacagtatgagaacaccagaacatatgaacttcaaagcaaaaaagatactgagacagaa
aatcctccagttgaaaacacattatctccaaagctagaaattacagagaaatgggaaaag
tattggaatgaatatggaggaggactattgtggcaaagttggcaagaaaaacatccgggt
caagcactatcttctgaaccttggaactttcctgatacaaaggaagaatgggagcaacat
tatagtcaactttattggtattatttggaacaatttcagtattgggaagctcagggttgg
acttttgatgcctcgcaaagctgtgatacagatacttacacatctaaaacagaagctgat
gacaagaacgatgaaaaatgcatgaaagttgacttagtatcttttccatcttcacctatt
atggttgataatgatagctctggtacaagtgataaggatcatagtgaaatacttgatgga
attagtaacataaaactgaattcagaggaagtaacacagagccaattagattcctgtaca
agtcatgatggtcatcaacagctaagtgaagttagtagcaaaagagagtgccctgcttcc
ggccaaagtgaaccacgtaatggaggaaccaatgaggaaagcaactcatcggggaataca
aacacagacccaccagctgaggattcacagaagtcttcaggagcaaacacaagcaaagac
agaccacatgccagtggtactgatggagatgaaagtgaggaagacccacctgagcataag
ccaagcaaactgaagaggagccatgaactggacattgatgaaaacccagcttcagacttt
gatgacagtggttcccttctaggattcaagtatggctcaggacaaaaatatggtggaatc
ccaaatttcagtcatcggcaggtcaggtatttagagaagaatgtgaagcttaagtctaag
tacctagacatgcgcagacaaataaagatgaaaaacaaacacatcttctttaccaaagag
tcagaaaaaccatttttcaagaaaagcaaaattctgagtaaggtagaaaaattcctcaca
tgggttaataaaccaatggatgaagaagcatcacaggaatcatcttctcatgacaatgtg
cacgacgcttccacaagtagtgattcagaggaacaagacatgtctgttaaaaaaggtgat
gacctactggagactaataatccagaacctgaaaagtgtcagagcgtatcttcagctggt
gaacttgaaacagaaaactatgaaagagacagcttgctagcaactgttccagatgagcag
gattgtgttactcaagaagtgccagactcccgccaggcagaaactgaagctgaagtgaaa
aagaagaagaacaagaagaagaacaaaaaggtgaatggtctgcctcctgaaatagctgct
gttcctgagctggcaaaatactgggcccagaggtacaggctcttctcccgttttgatgat
gggattaagttggacagagagggctggttttcagttacacccgagaagattgctgaacac
attgctggccgtgttagtcagtccttcaagtgtgacgttgtagtagacgcattctgtgga
gttggaggaaataccattcagtttgccttaacaggaatgagagtgattgccattgatatc
gatcctgttaagattgcccttgctcgcaataatgcagaagtttatgggatagcagataag
atagagttcatctgtggagatttcttgctgctggcttcttttttaaaggctgatgttgtg
ttcctcagcccaccttggggagggccagactatgccactgcagagacctttgacattaga
acaatgatgtctcctgatggctttgaaattttcagactttctaagaagatcactaataat
attgtttattttcttccaagaaatgctgatattgaccaggtggcatccttagctgggcct
ggagggcaagtggaaatagaacagaacttccttaacaacaaattgaagacaatcactgca
tattttggtgacctaattcgaagaccagcctctgaaacctaa

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