KEGG   PATHWAY: lby00010
Entry
lby00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Leadbetterella byssophila
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
lby00010  Glycolysis / Gluconeogenesis
lby00010

Module
lby_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lby00010]
lby_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lby00010]
lby_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lby00010]
lby_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lby00010]
Other DBs
GO: 0006096 0006094
Organism
Leadbetterella byssophila [GN:lby]
Gene
Lbys_2938  ROK family protein [KO:K25026] [EC:2.7.1.2]
Lbys_3384  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Lbys_1517  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Lbys_0665  D-fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Lbys_0012  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Lbys_3010  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Lbys_2063  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Lbys_0926  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Lbys_3021  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Lbys_1671  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Lbys_0613  enolase [KO:K01689] [EC:4.2.1.11]
Lbys_2028  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Lbys_2059  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
Lbys_1402  Transketolase central region [KO:K00162] [EC:1.2.4.1]
Lbys_1333  catalytic domain-containing protein of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Lbys_3490  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Lbys_2718  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Lbys_0218  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Lbys_2891  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Lbys_3134  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Lbys_2505  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Lbys_0312  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K20866] [EC:3.1.3.10]
Lbys_1694  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K01835] [EC:5.4.2.2]
Lbys_2607  Aldehyde Dehydrogenase [KO:K00131] [EC:1.2.1.9]
Lbys_0454  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
lby00020  Citrate cycle (TCA cycle)
lby00030  Pentose phosphate pathway
lby00500  Starch and sucrose metabolism
lby00620  Pyruvate metabolism
lby00640  Propanoate metabolism
lby00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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