KEGG   PATHWAY: msem00010
Entry
msem00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Metabacillus sediminilitoris
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
msem00010  Glycolysis / Gluconeogenesis
msem00010

Module
msem_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msem00010]
msem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msem00010]
msem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msem00010]
msem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msem00010]
Other DBs
GO: 0006096 0006094
Organism
Metabacillus sediminilitoris [GN:msem]
Gene
GMB29_01720  [KO:K00138] [EC:1.2.1.-]
GMB29_03640  [KO:K01835] [EC:5.4.2.2]
GMB29_05635  [KO:K01222] [EC:3.2.1.86]
GMB29_05665  [KO:K00128] [EC:1.2.1.3]
GMB29_06090  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GMB29_06125  [KO:K01006] [EC:2.7.9.1]
GMB29_06295  [KO:K01624] [EC:4.1.2.13]
GMB29_06400  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GMB29_06550  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GMB29_07585  [KO:K00627] [EC:2.3.1.12]
GMB29_07590  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GMB29_08300  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
GMB29_08330  [KO:K01810] [EC:5.3.1.9]
GMB29_09220  [KO:K04041] [EC:3.1.3.11]
GMB29_09415  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GMB29_09420  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
GMB29_09435  [KO:K00128] [EC:1.2.1.3]
GMB29_09460  [KO:K00001] [EC:1.1.1.1]
GMB29_09590  [KO:K01624] [EC:4.1.2.13]
GMB29_10365  [KO:K13979] [EC:1.1.1.2]
GMB29_10690  [KO:K00150] [EC:1.2.1.59]
GMB29_10695  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
GMB29_10935  [KO:K00128] [EC:1.2.1.3]
GMB29_10955  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GMB29_10970  [KO:K00627] [EC:2.3.1.12]
GMB29_12125  [KO:K02777] [EC:2.7.1.-]
GMB29_16320  [KO:K02777] [EC:2.7.1.-]
GMB29_16955  [KO:K20118] [EC:2.7.1.199]
GMB29_16990  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GMB29_17010  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GMB29_17015  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GMB29_18230  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GMB29_18235  [KO:K00627] [EC:2.3.1.12]
GMB29_18240  [KO:K00162] [EC:1.2.4.1]
GMB29_18245  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
GMB29_18995  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GMB29_19615  [KO:K25026]
GMB29_20800  [KO:K00150] [EC:1.2.1.59]
GMB29_20880  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GMB29_20885  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GMB29_21025  [KO:K01895] [EC:6.2.1.1]
GMB29_21090  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GMB29_21465  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
GMB29_22455  [KO:K06859] [EC:5.3.1.9]
GMB29_22665  [KO:K01810] [EC:5.3.1.9]
GMB29_23460  [KO:K00850] [EC:2.7.1.11]
GMB29_23870  [KO:K01689] [EC:4.2.1.11]
GMB29_23875  [KO:K15633] [EC:5.4.2.12]
GMB29_23880  [KO:K01803] [EC:5.3.1.1]
GMB29_23885  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GMB29_23890  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GMB29_24175  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GMB29_24460  [KO:K01624] [EC:4.1.2.13]
GMB29_24940  [KO:K01785] [EC:5.1.3.3]
GMB29_25155  [KO:K01624] [EC:4.1.2.13]
GMB29_25160  [KO:K01624] [EC:4.1.2.13]
GMB29_25720  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
GMB29_25730  [KO:K01624] [EC:4.1.2.13]
GMB29_26530  [KO:K01785] [EC:5.1.3.3]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
msem00020  Citrate cycle (TCA cycle)
msem00030  Pentose phosphate pathway
msem00500  Starch and sucrose metabolism
msem00620  Pyruvate metabolism
msem00640  Propanoate metabolism
msem00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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