KEGG   PATHWAY: mthi00030
Entry
mthi00030                   Pathway                                
Name
Pentose phosphate pathway - Mixta theicola
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mthi00030  Pentose phosphate pathway
mthi00030

Module
mthi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mthi00030]
mthi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mthi00030]
mthi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mthi00030]
mthi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mthi00030]
mthi_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:mthi00030]
mthi_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:mthi00030]
Other DBs
GO: 0006098
Organism
Mixta theicola [GN:mthi]
Gene
C7M52_03892  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
C7M52_01194  zwf; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
C7M52_02137  pgl_1; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
C7M52_04084  pgl_2; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
C7M52_00939  gnd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
C7M52_03165  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
C7M52_00219  tktA; Transketolase 1 [KO:K00615] [EC:2.2.1.1]
C7M52_00891  fas2; Ferredoxin fas2 [KO:K00615] [EC:2.2.1.1]
C7M52_00892  dxs_3; 1-deoxy-D-xylulose-5-phosphate synthase [KO:K00615] [EC:2.2.1.1]
C7M52_00732  tkt_1; Transketolase [KO:K00615] [EC:2.2.1.1]
C7M52_00733  dxs_1; 1-deoxy-D-xylulose-5-phosphate synthase [KO:K00615] [EC:2.2.1.1]
C7M52_00575  tktB; Transketolase 2 [KO:K00615] [EC:2.2.1.1]
C7M52_00783  dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase [KO:K00615] [EC:2.2.1.1]
C7M52_00784  tkt_2; Transketolase [KO:K00615] [EC:2.2.1.1]
C7M52_00576  tal; Transaldolase [KO:K00616] [EC:2.2.1.2]
C7M52_01827  talB_1; Transaldolase B [KO:K00616] [EC:2.2.1.2]
C7M52_02747  talB_2; Transaldolase B [KO:K00616] [EC:2.2.1.2]
C7M52_00228  rpiA; Ribose-5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
C7M52_01828  rpiB; Ribose-5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
C7M52_03332  xpkA; Xylulose-5-phosphate phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
C7M52_02773  deoC; Deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
C7M52_03595  rbsK; Ribokinase [KO:K00852] [EC:2.7.1.15]
C7M52_02771  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
C7M52_02194  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
C7M52_01667  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
C7M52_01195  eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C7M52_03962  gcd_2; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
C7M52_01473  gcd_1; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
C7M52_03949  Gluconate 2-dehydrogenase flavoprotein [KO:K06151] [EC:1.1.99.3]
C7M52_03948  Gluconate 2-dehydrogenase subunit 3 [KO:K06152] [EC:1.1.99.3]
C7M52_03532  tkrA; Glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
C7M52_03231  gntK; Thermoresistant gluconokinase [KO:K00851] [EC:2.7.1.12]
C7M52_03345  kdgK_1; 2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
C7M52_03530  kdgK_2; 2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
C7M52_03437  lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [KO:K11645] [EC:4.1.2.13]
C7M52_00223  fbaA; Fructose-bisphosphate aldolase class 2 [KO:K01624] [EC:4.1.2.13]
C7M52_04072  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
C7M52_03722  glpX; Fructose-1,6-bisphosphatase 1 class 2 [KO:K02446] [EC:3.1.3.11]
C7M52_03714  pfkA; ATP-dependent 6-phosphofructokinase isozyme 1 [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
mthi00010  Glycolysis / Gluconeogenesis
mthi00040  Pentose and glucuronate interconversions
mthi00052  Galactose metabolism
mthi00230  Purine metabolism
mthi00240  Pyrimidine metabolism
mthi00340  Histidine metabolism
mthi00630  Glyoxylate and dicarboxylate metabolism
mthi00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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