KEGG   PATHWAY: ncs00030
Entry
ncs00030                    Pathway                                
Name
Pentose phosphate pathway - Naumovozyma castellii
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ncs00030  Pentose phosphate pathway
ncs00030

Module
ncs_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ncs00030]
ncs_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:ncs00030]
ncs_M00006  Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH:ncs00030]
ncs_M00007  Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:ncs00030]
Other DBs
GO: 0006098
Organism
Naumovozyma castellii [GN:ncs]
Gene
NCAS_0A00860  NCAS0A00860; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
NCAS_0A02150  NCAS0A02150; uncharacterized protein [KO:K00616] [EC:2.2.1.2]
NCAS_0A02620  NCAS0A02620; ribose phosphate diphosphokinase subunit PRS1 [KO:K00948] [EC:2.7.6.1]
NCAS_0A04350  NCAS0A04350; phosphoglucomutase PGM1 [KO:K01835] [EC:5.4.2.2]
NCAS_0A05410  NCAS0A05410; uncharacterized protein [KO:K01057] [EC:3.1.1.31]
NCAS_0A09680  NCAS0A09680; ribulose-phosphate 3-epimerase RPE1 [KO:K01783] [EC:5.1.3.1]
NCAS_0A11230  NCAS0A11230; transketolase TKL1 [KO:K00615] [EC:2.2.1.1]
NCAS_0A12560  NCAS0A12560; ribose phosphate diphosphokinase subunit PRS3 [KO:K00948] [EC:2.7.6.1]
NCAS_0A14380  NCAS0A14380; ribose phosphate diphosphokinase subunit PRS2 [KO:K00948] [EC:2.7.6.1]
NCAS_0B02180  NCAS0B02180; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
NCAS_0B02520  NCAS0B02520; gluconokinase [KO:K00851] [EC:2.7.1.12]
NCAS_0B06770  NCAS0B06770; ribose-5-phosphate isomerase RKI1 [KO:K01807] [EC:5.3.1.6]
NCAS_0B08520  NCAS0B08520; uncharacterized protein [KO:K00852] [EC:2.7.1.15]
NCAS_0C00410  NCAS0C00410; phosphoribomutase PRM15 [KO:K01835] [EC:5.4.2.2]
NCAS_0C03590  NCAS0C03590; ribose phosphate diphosphokinase subunit PRS5 [KO:K00948] [EC:2.7.6.1]
NCAS_0D01430  NCAS0D01430; 6-phosphogluconolactonase SOL3 [KO:K01057] [EC:3.1.1.31]
NCAS_0D04360  NCAS0D04360; 6-phosphofructokinase subunit beta [KO:K00850] [EC:2.7.1.11]
NCAS_0D04620  NCAS0D04620; uncharacterized protein [KO:K01057] [EC:3.1.1.31]
NCAS_0E03860  NCAS0E03860; 6-phosphogluconolactonase SOL4 [KO:K01057] [EC:3.1.1.31]
NCAS_0F00130  NCAS0F00130; uncharacterized protein [KO:K00036] [EC:1.1.1.49 1.1.1.363]
NCAS_0F00490  NCAS0F00490; 6-phosphofructokinase subunit alpha [KO:K00850] [EC:2.7.1.11]
NCAS_0F01470  NCAS0F01470; phosphoglucomutase PGM2 [KO:K01835] [EC:5.4.2.2]
NCAS_0F02030  NCAS0F02030; phosphogluconate dehydrogenase (decarboxylating) GND1 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
NCAS_0H02920  NCAS0H02920; fructose-bisphosphate aldolase FBA1 [KO:K01624] [EC:4.1.2.13]
NCAS_0H03590  NCAS0H03590; uncharacterized protein [KO:K00036] [EC:1.1.1.49 1.1.1.363]
NCAS_0I01030  NCAS0I01030; transketolase TKL2 [KO:K00615] [EC:2.2.1.1]
NCAS_0J01140  NCAS0J01140; sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate transaldolase TAL1 [KO:K00616] [EC:2.2.1.2]
NCAS_0J01330  NCAS0J01330; fructose 1,6-bisphosphate 1-phosphatase [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ncs00010  Glycolysis / Gluconeogenesis
ncs00040  Pentose and glucuronate interconversions
ncs00052  Galactose metabolism
ncs00230  Purine metabolism
ncs00240  Pyrimidine metabolism
ncs00340  Histidine metabolism
ncs00630  Glyoxylate and dicarboxylate metabolism
ncs00750  Vitamin B6 metabolism
KO pathway
ko00030   

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