KEGG   PATHWAY: nue00970
Entry
nue00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Nitrosopumilus ureiphilus
Class
Genetic Information Processing; Translation
Pathway map
nue00970  Aminoacyl-tRNA biosynthesis
nue00970

Organism
Nitrosopumilus ureiphilus [GN:nue]
Gene
C5F50_00310  glyS; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
C5F50_00345  [KO:K14225]
C5F50_00465  [KO:K14223]
C5F50_00500  [KO:K14228]
C5F50_00505  [KO:K03330] [EC:6.3.5.7]
C5F50_00510  [KO:K09482] [EC:6.3.5.7]
C5F50_01000  [KO:K14219]
C5F50_01065  [KO:K14229]
C5F50_01205  [KO:K14237]
C5F50_01365  [KO:K14218]
C5F50_01425  [KO:K14228]
C5F50_01535  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
C5F50_01555  [KO:K14233]
C5F50_01630  [KO:K14218]
C5F50_01720  [KO:K14229]
C5F50_01725  [KO:K14221]
C5F50_01895  [KO:K14230]
C5F50_02010  [KO:K14226]
C5F50_02265  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
C5F50_02305  [KO:K14228]
C5F50_02535  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
C5F50_02540  [KO:K01872] [EC:6.1.1.7]
C5F50_03235  [KO:K14225]
C5F50_03485  [KO:K14224]
C5F50_03705  [KO:K14228]
C5F50_04285  [KO:K14219]
C5F50_04415  lysS; lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
C5F50_04535  [KO:K14232]
C5F50_04800  [KO:K01881] [EC:6.1.1.15]
C5F50_05070  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
C5F50_05270  [KO:K14233]
C5F50_06050  [KO:K14220]
C5F50_06390  [KO:K14231]
C5F50_06440  [KO:K02434] [EC:6.3.5.6 6.3.5.7]
C5F50_06445  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
C5F50_06450  [KO:K02435] [EC:6.3.5.6 6.3.5.7]
C5F50_06455  [KO:K09759] [EC:6.1.1.23]
C5F50_06965  [KO:K01868] [EC:6.1.1.3]
C5F50_07640  [KO:K01874] [EC:6.1.1.10]
C5F50_07660  [KO:K01883] [EC:6.1.1.16]
C5F50_08080  [KO:K09759] [EC:6.1.1.23]
C5F50_08545  [KO:K14227]
C5F50_08780  [KO:K01870] [EC:6.1.1.5]
C5F50_09035  [KO:K14234]
C5F50_10195  [KO:K14233]
C5F50_10825  [KO:K14234]
C5F50_10905  [KO:K01873] [EC:6.1.1.9]
C5F50_11005  [KO:K01890] [EC:6.1.1.20]
C5F50_11010  [KO:K01889] [EC:6.1.1.20]
C5F50_11015  [KO:K01867] [EC:6.1.1.2]
C5F50_11045  [KO:K14218]
C5F50_11055  [KO:K14227]
C5F50_11075  [KO:K14234]
C5F50_11140  [KO:K01875] [EC:6.1.1.11]
C5F50_11300  [KO:K14219]
C5F50_11825  [KO:K14237]
C5F50_11830  [KO:K14219]
C5F50_11920  [KO:K14225]
C5F50_12295  [KO:K14237]
C5F50_12380  [KO:K01866] [EC:6.1.1.1]
C5F50_12555  [KO:K14232]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
nue00250  Alanine, aspartate and glutamate metabolism
nue00260  Glycine, serine and threonine metabolism
nue00270  Cysteine and methionine metabolism
nue00290  Valine, leucine and isoleucine biosynthesis
nue00300  Lysine biosynthesis
nue00330  Arginine and proline metabolism
nue00340  Histidine metabolism
nue00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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