KEGG   PATHWAY: aak00630
Entry
aak00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aminobacter aminovorans
Class
Metabolism; Carbohydrate metabolism
Pathway map
aak00630  Glyoxylate and dicarboxylate metabolism
aak00630

Module
aak_M00012  Glyoxylate cycle [PATH:aak00630]
aak_M00621  Glycine cleavage system [PATH:aak00630]
aak_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:aak00630]
Other DBs
GO: 0046487 0043648
Organism
Aminobacter aminovorans [GN:aak]
Gene
AA2016_5190  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AA2016_1267  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AA2016_1778  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AA2016_0046  malate synthase [KO:K01638] [EC:2.3.3.9]
AA2016_0620  malate synthase [KO:K01638] [EC:2.3.3.9]
AA2016_5623  malate synthase [KO:K01638] [EC:2.3.3.9]
AA2016_6451  malate synthase [KO:K01638] [EC:2.3.3.9]
AA2016_0967  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AA2016_2584  hypothetical protein [KO:K01647] [EC:2.3.3.1]
AA2016_2585  citrate synthase [KO:K01647] [EC:2.3.3.1]
AA2016_3809  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AA2016_0965  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AA2016_5788  succinyl-CoA synthetase subunit alpha [KO:K08692] [EC:6.2.1.9]
AA2016_5787  malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
AA2016_1497  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_3648  hypothetical protein [KO:K00626] [EC:2.3.1.9]
AA2016_4724  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_5325  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
AA2016_1358  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_3676  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_6395  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_4785  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AA2016_1359  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AA2016_2944  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AA2016_5786  Malyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
AA2016_0826  acetyl-CoA carboxylase [KO:K01965] [EC:6.4.1.3]
AA2016_0827  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AA2016_0824  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AA2016_5153  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
AA2016_5150  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
AA2016_5148  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
AA2016_6335  catalase [KO:K03781] [EC:1.11.1.6]
AA2016_4410  Catalase [KO:K03781] [EC:1.11.1.6]
AA2016_0008  2-hydroxyacid dehydrogenase [KO:K00015] [EC:1.1.1.26]
AA2016_6193  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AA2016_5485  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AA2016_1150  3-phosphoglycerate dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AA2016_3143  hypothetical protein [KO:K01091] [EC:3.1.3.18]
AA2016_5384  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AA2016_3766  hypothetical protein [KO:K01091] [EC:3.1.3.18]
AA2016_5785  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AA2016_6015  Serine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AA2016_6436  Serine-glyoxylate aminotransferase apoenzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AA2016_5997  Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_5194  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_1908  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_1968  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_3756  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_3763  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_6432  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AA2016_2628  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AA2016_4058  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AA2016_5814  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AA2016_2624  Glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
AA2016_3413  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
AA2016_5992  glycine cleavage system protein T (aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
AA2016_5253  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AA2016_5261  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AA2016_1832  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AA2016_2626  Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AA2016_3415  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AA2016_4084  Glycine cleavage system T protein (Aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
AA2016_4101  Glycine cleavage system T protein (Aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
AA2016_1692  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AA2016_2627  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AA2016_0977  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AA2016_6105  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AA2016_3784  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AA2016_2625  Glycine cleavage system H protein [KO:K02437]
AA2016_3414  glycine cleavage system protein H [KO:K02437]
AA2016_3479  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AA2016_3480  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AA2016_3481  Tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
AA2016_5790  hypothetical protein [KO:K11529] [EC:2.7.1.165]
AA2016_1905  TtuD3 hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AA2016_6202  Tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AA2016_6046  Tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AA2016_2045  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AA2016_5396  hypothetical protein [KO:K00126] [EC:1.17.1.9]
AA2016_5394  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
AA2016_5393  formate dehydrogenase subunit beta [KO:K00124]
AA2016_5392  formate dehydrogenase [KO:K00127]
AA2016_3981  hypothetical protein [KO:K01432] [EC:3.5.1.9]
AA2016_5749  esterase [KO:K01432] [EC:3.5.1.9]
AA2016_3110  Formamidase FmdA [KO:K01455] [EC:3.5.1.49]
AA2016_4157  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
AA2016_3966  AMP-dependent synthetase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aak00010  Glycolysis / Gluconeogenesis
aak00020  Citrate cycle (TCA cycle)
aak00030  Pentose phosphate pathway
aak00053  Ascorbate and aldarate metabolism
aak00071  Fatty acid degradation
aak00230  Purine metabolism
aak00250  Alanine, aspartate and glutamate metabolism
aak00260  Glycine, serine and threonine metabolism
aak00620  Pyruvate metabolism
aak00750  Vitamin B6 metabolism
aak00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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