KEGG   PATHWAY: aba00970
Entry
aba00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Candidatus Koribacter versatilis
Class
Genetic Information Processing; Translation
Pathway map
aba00970  Aminoacyl-tRNA biosynthesis
aba00970

Organism
Candidatus Koribacter versatilis [GN:aba]
Gene
Acid345_R0033  tRNA-Ala [KO:K14218]
Acid345_R0023  tRNA-Ala [KO:K14218]
Acid345_R0045  tRNA-Ala [KO:K14218]
Acid345_R0028  tRNA-Arg [KO:K14219]
Acid345_R0015  tRNA-Arg [KO:K14219]
Acid345_R0040  tRNA-Arg [KO:K14219]
Acid345_R0016  tRNA-Arg [KO:K14219]
Acid345_R0001  tRNA-Arg [KO:K14219]
Acid345_R0018  tRNA-Asn [KO:K14220]
Acid345_R0038  tRNA-Asp [KO:K14221]
Acid345_R0010  tRNA-Cys [KO:K14222]
Acid345_R0050  tRNA-Gln [KO:K14223]
Acid345_R0012  tRNA-Gln [KO:K14223]
Acid345_R0022  tRNA-Glu [KO:K14224]
Acid345_R0034  tRNA-Glu [KO:K14224]
Acid345_R0009  tRNA-Gly [KO:K14225]
Acid345_R0019  tRNA-Gly [KO:K14225]
Acid345_R0053  tRNA-Gly [KO:K14225]
Acid345_R0035  tRNA-His [KO:K14226]
Acid345_R0046  tRNA-Ile [KO:K14227]
Acid345_R0005  tRNA-Leu [KO:K14228]
Acid345_R0024  tRNA-Leu [KO:K14228]
Acid345_R0017  tRNA-Leu [KO:K14228]
Acid345_R0027  tRNA-Leu [KO:K14228]
Acid345_R0003  tRNA-Leu [KO:K14228]
Acid345_R0025  tRNA-Lys [KO:K14229]
Acid345_R0007  tRNA-Lys [KO:K14229]
Acid345_R0041  tRNA-Met [KO:K14230]
Acid345_R0030  tRNA-Met [KO:K14230]
Acid345_R0029  tRNA-Met [KO:K14230]
Acid345_R0011  tRNA-Phe [KO:K14231]
Acid345_R0006  tRNA-Pro [KO:K14232]
Acid345_R0002  tRNA-Pro [KO:K14232]
Acid345_R0036  tRNA-Pro [KO:K14232]
Acid345_R0042  tRNA-Ser [KO:K14233]
Acid345_R0032  tRNA-Ser [KO:K14233]
Acid345_R0048  tRNA-Ser [KO:K14233]
Acid345_R0020  tRNA-Ser [KO:K14233]
Acid345_R0055  tRNA-Thr [KO:K14234]
Acid345_R0052  tRNA-Thr [KO:K14234]
Acid345_R0013  tRNA-Thr [KO:K14234]
Acid345_R0051  tRNA-Trp [KO:K14235]
Acid345_R0054  tRNA-Tyr [KO:K14236]
Acid345_R0037  tRNA-Val [KO:K14237]
Acid345_R0008  tRNA-Val [KO:K14237]
Acid345_R0039  tRNA-Val [KO:K14237]
Acid345_3027  Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
Acid345_0184  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
Acid345_0051  glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase [KO:K09698] [EC:6.1.1.24]
Acid345_0501  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Acid345_4716  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Acid345_0499  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Acid345_3983  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Acid345_4033  Threonyl/alanyl tRNA synthetase, SAD [KO:K01872] [EC:6.1.1.7]
Acid345_1204  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Acid345_4597  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
Acid345_1194  glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
Acid345_1195  glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
Acid345_4736  Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Acid345_0391  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Acid345_4521  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
Acid345_3992  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Acid345_2030  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Acid345_4228  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Acid345_0132  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Acid345_1328  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Acid345_1861  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Acid345_1286  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
Acid345_2032  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Acid345_1063  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Acid345_1205  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Acid345_0716  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Acid345_0718  phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
Acid345_3069  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Acid345_3860  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
aba00250  Alanine, aspartate and glutamate metabolism
aba00260  Glycine, serine and threonine metabolism
aba00270  Cysteine and methionine metabolism
aba00290  Valine, leucine and isoleucine biosynthesis
aba00300  Lysine biosynthesis
aba00330  Arginine and proline metabolism
aba00340  Histidine metabolism
aba00380  Tryptophan metabolism
aba00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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