KEGG   PATHWAY: achr00630
Entry
achr00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Achromobacter sp. AONIH1
Class
Metabolism; Carbohydrate metabolism
Pathway map
achr00630  Glyoxylate and dicarboxylate metabolism
achr00630

Module
achr_M00012  Glyoxylate cycle [PATH:achr00630]
achr_M00621  Glycine cleavage system [PATH:achr00630]
Other DBs
GO: 0046487 0043648
Organism
Achromobacter sp. AONIH1 [GN:achr]
Gene
C2U31_16250  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
C2U31_21745  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C2U31_13190  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C2U31_13350  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
C2U31_04090  malate synthase G [KO:K01638] [EC:2.3.3.9]
C2U31_13405  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
C2U31_13440  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
C2U31_13580  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
C2U31_13585  citrate synthase [KO:K01647] [EC:2.3.3.1]
C2U31_29665  aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
C2U31_25815  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
C2U31_28075  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
C2U31_08215  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_26155  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_22140  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_05515  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_11120  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_16060  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C2U31_12130  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C2U31_00570  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C2U31_13635  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C2U31_11125  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C2U31_15045  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
C2U31_15050  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
C2U31_15055  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
C2U31_10745  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
C2U31_08585  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
C2U31_24730  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
C2U31_12980  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
C2U31_06750  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
C2U31_02860  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
C2U31_24020  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
C2U31_12260  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C2U31_08115  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C2U31_15385  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C2U31_00390  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
C2U31_00400  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
C2U31_21195  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2U31_17550  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2U31_13550  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2U31_17895  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2U31_01940  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C2U31_00395  gcvH; glycine cleavage system protein H [KO:K02437]
C2U31_17670  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
C2U31_17665  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
C2U31_17660  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
C2U31_09055  glycerate kinase [KO:K00865] [EC:2.7.1.165]
C2U31_17655  glycerate kinase [KO:K11529] [EC:2.7.1.165]
C2U31_02410  fumarate hydratase [KO:K03779] [EC:4.2.1.32]
C2U31_02405  fumarate hydratase [KO:K03780] [EC:4.2.1.32]
C2U31_25745  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
C2U31_09545  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C2U31_28770  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
C2U31_06640  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
C2U31_06645  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
C2U31_28760  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
C2U31_06650  fdxH; formate dehydrogenase subunit beta [KO:K00124]
C2U31_28755  formate dehydrogenase [KO:K00124]
C2U31_06655  formate dehydrogenase subunit gamma [KO:K00127]
C2U31_28750  formate dehydrogenase subunit gamma [KO:K00127]
C2U31_10755  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
C2U31_07095  esterase [KO:K01432] [EC:3.5.1.9]
C2U31_14410  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
C2U31_09315  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
C2U31_15380  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
C2U31_16775  formamidase [KO:K01455] [EC:3.5.1.49]
C2U31_17350  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
achr00010  Glycolysis / Gluconeogenesis
achr00020  Citrate cycle (TCA cycle)
achr00030  Pentose phosphate pathway
achr00053  Ascorbate and aldarate metabolism
achr00071  Fatty acid degradation
achr00230  Purine metabolism
achr00250  Alanine, aspartate and glutamate metabolism
achr00260  Glycine, serine and threonine metabolism
achr00620  Pyruvate metabolism
achr00710  Carbon fixation by Calvin cycle
achr00750  Vitamin B6 metabolism
achr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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