KEGG   PATHWAY: afa00970
Entry
afa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Alcaligenes faecalis ZD02
Class
Genetic Information Processing; Translation
Pathway map
afa00970  Aminoacyl-tRNA biosynthesis
afa00970

Organism
Alcaligenes faecalis ZD02 [GN:afa]
Gene
UZ73_07160  tRNA-Ala [KO:K14218]
UZ73_09345  tRNA-Ala [KO:K14218]
UZ73_15210  tRNA-Ala [KO:K14218]
UZ73_04855  tRNA-Ala [KO:K14218]
UZ73_07175  tRNA-Ala [KO:K14218]
UZ73_05655  tRNA-Arg [KO:K14219]
UZ73_05680  tRNA-Arg [KO:K14219]
UZ73_06035  tRNA-Arg [KO:K14219]
UZ73_06365  tRNA-Arg [KO:K14219]
UZ73_08795  tRNA-Arg [KO:K14219]
UZ73_15290  tRNA-Asn [KO:K14220]
UZ73_15300  tRNA-Asn [KO:K14220]
UZ73_07185  tRNA-Asp [KO:K14221]
UZ73_07170  tRNA-Asp [KO:K14221]
UZ73_04050  tRNA-Cys [KO:K14222]
UZ73_00690  tRNA-Cys [KO:K14222]
UZ73_07685  tRNA-Gln [KO:K14223]
UZ73_07165  tRNA-Glu [KO:K14224]
UZ73_07180  tRNA-Glu [KO:K14224]
UZ73_04045  tRNA-Gly [KO:K14225]
UZ73_04055  tRNA-Gly [KO:K14225]
UZ73_08040  tRNA-Gly [KO:K14225]
UZ73_10955  tRNA-Gly [KO:K14225]
UZ73_06005  tRNA-His [KO:K14226]
UZ73_04860  tRNA-Ile [KO:K14227]
UZ73_09350  tRNA-Ile [KO:K14227]
UZ73_15205  tRNA-Ile [KO:K14227]
UZ73_01650  tRNA-Leu [KO:K14228]
UZ73_01670  tRNA-Leu [KO:K14228]
UZ73_03640  tRNA-Leu [KO:K14228]
UZ73_08480  tRNA-Leu [KO:K14228]
UZ73_01600  tRNA-Leu [KO:K14228]
UZ73_03665  tRNA-Leu [KO:K14228]
UZ73_16910  tRNA-Leu [KO:K14228]
UZ73_02675  tRNA-Lys [KO:K14229]
UZ73_06610  tRNA-Lys [KO:K14229]
UZ73_05245  tRNA-Met [KO:K14230]
UZ73_05250  tRNA-Met [KO:K14230]
UZ73_15775  tRNA-Met [KO:K14230]
UZ73_16260  tRNA-Met [KO:K14230]
UZ73_12780  tRNA-Phe [KO:K14231]
UZ73_18245  tRNA-Pro [KO:K14232]
UZ73_06060  tRNA-Pro [KO:K14232]
UZ73_06085  tRNA-Pro [KO:K14232]
UZ73_03660  tRNA-Ser [KO:K14233]
UZ73_05755  tRNA-Ser [KO:K14233]
UZ73_13980  tRNA-Ser [KO:K14233]
UZ73_03725  tRNA-Ser [KO:K14233]
UZ73_10960  tRNA-Thr [KO:K14234]
UZ73_12020  tRNA-Thr [KO:K14234]
UZ73_15265  tRNA-Thr [KO:K14234]
UZ73_19150  tRNA-Trp [KO:K14235]
UZ73_10950  tRNA-Tyr [KO:K14236]
UZ73_01515  tRNA-Val [KO:K14237]
UZ73_17720  tRNA-Val [KO:K14237]
UZ73_14505  tRNA-Val [KO:K14237]
UZ73_12520  tRNA-Sec [KO:K14238]
UZ73_13865  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
UZ73_09485  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
UZ73_08500  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
UZ73_04315  glutamyl-tRNA amidotransferase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
UZ73_13530  glutamyl-tRNA amidotransferase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
UZ73_13525  gatB; glutamyl-tRNA amidotransferase [KO:K02434] [EC:6.3.5.6 6.3.5.7]
UZ73_13535  glutamyl-tRNA amidotransferase [KO:K02435] [EC:6.3.5.6 6.3.5.7]
UZ73_06790  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
UZ73_01985  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
UZ73_08695  threonine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
UZ73_11655  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
UZ73_06515  glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
UZ73_06520  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
UZ73_17980  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
UZ73_03740  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
UZ73_12530  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
UZ73_05780  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
UZ73_07940  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
UZ73_09495  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
UZ73_01950  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
UZ73_03080  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
UZ73_16730  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
UZ73_16995  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
UZ73_09940  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
UZ73_15100  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
UZ73_01925  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
UZ73_18055  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
UZ73_18060  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
UZ73_13950  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
UZ73_05360  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
afa00250  Alanine, aspartate and glutamate metabolism
afa00260  Glycine, serine and threonine metabolism
afa00270  Cysteine and methionine metabolism
afa00290  Valine, leucine and isoleucine biosynthesis
afa00300  Lysine biosynthesis
afa00330  Arginine and proline metabolism
afa00340  Histidine metabolism
afa00380  Tryptophan metabolism
afa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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