KEGG   PATHWAY: amed00970
Entry
amed00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Aeromonas media
Class
Genetic Information Processing; Translation
Pathway map
amed00970  Aminoacyl-tRNA biosynthesis
amed00970

Organism
Aeromonas media [GN:amed]
Gene
B224_t022  tRNA-Ala [KO:K14218]
B224_t023  tRNA-Ala [KO:K14218]
B224_t025  tRNA-Ala [KO:K14218]
B224_t026  tRNA-Ala [KO:K14218]
B224_t024  tRNA-Ala [KO:K14218]
B224_t002  tRNA-Ala [KO:K14218]
B224_t091  tRNA-Ala [KO:K14218]
B224_t125  tRNA-Ala [KO:K14218]
B224_t048  tRNA-Arg [KO:K14219]
B224_t078  tRNA-Arg [KO:K14219]
B224_t084  tRNA-Arg [KO:K14219]
B224_t085  tRNA-Arg [KO:K14219]
B224_t087  tRNA-Arg [KO:K14219]
B224_t088  tRNA-Arg [KO:K14219]
B224_t086  tRNA-Arg [KO:K14219]
B224_t102  tRNA-Arg [KO:K14219]
B224_t006  tRNA-Asn [KO:K14220]
B224_t042  tRNA-Asn [KO:K14220]
B224_t014  tRNA-Asn [KO:K14220]
B224_t050  tRNA-Asn [KO:K14220]
B224_t039  tRNA-Asn [KO:K14220]
B224_t041  tRNA-Asn [KO:K14220]
B224_t090  tRNA-Asp [KO:K14221]
B224_t108  tRNA-Asp [KO:K14221]
B224_t124  tRNA-Asp [KO:K14221]
B224_t066  tRNA-Cys [KO:K14222]
B224_t074  tRNA-Cys [KO:K14222]
B224_t031  tRNA-Gln [KO:K14223]
B224_t032  tRNA-Gln [KO:K14223]
B224_t034  tRNA-Gln [KO:K14223]
B224_t035  tRNA-Gln [KO:K14223]
B224_t037  tRNA-Gln [KO:K14223]
B224_t013  tRNA-Glu [KO:K14224]
B224_t103  tRNA-Glu [KO:K14224]
B224_t105  tRNA-Glu [KO:K14224]
B224_t082  tRNA-Glu [KO:K14224]
B224_t098  tRNA-Glu [KO:K14224]
B224_t107  tRNA-Glu [KO:K14224]
B224_t109  tRNA-Glu [KO:K14224]
B224_t072  tRNA-Gly [KO:K14225]
B224_t094  tRNA-Gly [KO:K14225]
B224_t016  tRNA-Gly [KO:K14225]
B224_t017  tRNA-Gly [KO:K14225]
B224_t019  tRNA-Gly [KO:K14225]
B224_t021  tRNA-Gly [KO:K14225]
B224_t075  tRNA-Gly [KO:K14225]
B224_t018  tRNA-Gly [KO:K14225]
B224_t067  tRNA-Gly [KO:K14225]
B224_t020  tRNA-Gly [KO:K14225]
B224_t073  tRNA-Gly [KO:K14225]
B224_t046  tRNA-His [KO:K14226]
B224_t101  tRNA-His [KO:K14226]
B224_t047  tRNA-His [KO:K14226]
B224_t001  tRNA-Ile [KO:K14227]
B224_t126  tRNA-Ile [KO:K14227]
B224_t092  tRNA-Ile [KO:K14227]
B224_t029  tRNA-Leu [KO:K14228]
B224_t065  tRNA-Leu [KO:K14228]
B224_t007  tRNA-Leu [KO:K14228]
B224_t010  tRNA-Leu [KO:K14228]
B224_t011  tRNA-Leu [KO:K14228]
B224_t009  tRNA-Leu [KO:K14228]
B224_t100  tRNA-Leu [KO:K14228]
B224_t008  tRNA-Leu [KO:K14228]
B224_t027  tRNA-Leu [KO:K14228]
B224_t083  tRNA-Leu [KO:K14228]
B224_t119  tRNA-Lys [KO:K14229]
B224_t111  tRNA-Lys [KO:K14229]
B224_t117  tRNA-Lys [KO:K14229]
B224_t115  tRNA-Lys [KO:K14229]
B224_t113  tRNA-Lys [KO:K14229]
B224_t123  tRNA-Lys [KO:K14229]
B224_t121  tRNA-Lys [KO:K14229]
B224_t012  tRNA-Met [KO:K14230]
B224_t028  tRNA-Met [KO:K14230]
B224_t056  tRNA-Met [KO:K14230]
B224_t064  tRNA-Met [KO:K14230]
B224_t061  tRNA-Met [KO:K14230]
B224_t059  tRNA-Met [KO:K14230]
B224_t062  tRNA-Met [KO:K14230]
B224_t063  tRNA-Met [KO:K14230]
B224_t057  tRNA-Met [KO:K14230]
B224_t058  tRNA-Met [KO:K14230]
B224_t060  tRNA-Met [KO:K14230]
B224_t030  tRNA-Met [KO:K14230]
B224_t036  tRNA-Met [KO:K14230]
B224_t033  tRNA-Met [KO:K14230]
B224_t003  tRNA-Phe [KO:K14231]
B224_t015  tRNA-Phe [KO:K14231]
B224_t005  tRNA-Phe [KO:K14231]
B224_t038  tRNA-Pro [KO:K14232]
B224_t068  tRNA-Pro [KO:K14232]
B224_t049  tRNA-Pro [KO:K14232]
B224_t099  tRNA-Pro [KO:K14232]
B224_t097  tRNA-Pro [KO:K14232]
B224_t089  tRNA-Ser [KO:K14233]
B224_t077  tRNA-Ser [KO:K14233]
B224_t076  tRNA-Ser [KO:K14233]
B224_t043  tRNA-Ser [KO:K14233]
B224_t045  tRNA-Ser [KO:K14233]
B224_t044  tRNA-Ser [KO:K14233]
B224_t004  tRNA-Thr [KO:K14234]
B224_t069  tRNA-Thr [KO:K14234]
B224_t104  tRNA-Thr [KO:K14234]
B224_t106  tRNA-Thr [KO:K14234]
B224_t093  tRNA-Trp [KO:K14235]
B224_t096  tRNA-Trp [KO:K14235]
B224_t070  tRNA-Tyr [KO:K14236]
B224_t080  tRNA-Tyr [KO:K14236]
B224_t079  tRNA-Tyr [KO:K14236]
B224_t081  tRNA-Tyr [KO:K14236]
B224_t095  tRNA-Tyr [KO:K14236]
B224_t071  tRNA-Tyr [KO:K14236]
B224_t051  tRNA-Val [KO:K14237]
B224_t053  tRNA-Val [KO:K14237]
B224_t054  tRNA-Val [KO:K14237]
B224_t052  tRNA-Val [KO:K14237]
B224_t055  tRNA-Val [KO:K14237]
B224_t110  tRNA-Val [KO:K14237]
B224_t118  tRNA-Val [KO:K14237]
B224_t122  tRNA-Val [KO:K14237]
B224_t112  tRNA-Val [KO:K14237]
B224_t114  tRNA-Val [KO:K14237]
B224_t116  tRNA-Val [KO:K14237]
B224_t120  tRNA-Val [KO:K14237]
B224_0668  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
B224_3651  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
B224_4716  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
B224_4516  hypothetical protein [KO:K01872] [EC:6.1.1.7]
B224_3665  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
B224_3708  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
B224_5652  glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
B224_5650  glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
B224_2374  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
B224_2658  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
B224_3063  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
B224_2263  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
B224_5480  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
B224_4708  valine tRNA synthetase [KO:K01873] [EC:6.1.1.9]
B224_0979  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
B224_4553  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
B224_0762  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
B224_5107  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
B224_5852  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
B224_2765  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
B224_2369  phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
B224_2368  phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
B224_0290  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
B224_0293  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
B224_1087  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
B224_5290  tryptophanyl-tRNA synthetase II [KO:K01867] [EC:6.1.1.2]
B224_0888  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
amed00250  Alanine, aspartate and glutamate metabolism
amed00260  Glycine, serine and threonine metabolism
amed00270  Cysteine and methionine metabolism
amed00290  Valine, leucine and isoleucine biosynthesis
amed00300  Lysine biosynthesis
amed00330  Arginine and proline metabolism
amed00340  Histidine metabolism
amed00380  Tryptophan metabolism
amed00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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