KEGG   PATHWAY: amm00240
Entry
amm00240                    Pathway                                
Name
Pyrimidine metabolism - Amycolatopsis mediterranei S699
Class
Metabolism; Nucleotide metabolism
Pathway map
amm00240  Pyrimidine metabolism
amm00240

Module
amm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:amm00240]
amm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:amm00240]
amm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:amm00240]
Other DBs
GO: 0006220 0006213
Organism
Amycolatopsis mediterranei S699 [GN:amm]
Gene
AMES_2724  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
AMES_2721  carA; carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
AMES_2718  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
AMES_2719  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
AMES_6187  pyrD; dihydroorotate oxidase [KO:K00254] [EC:1.3.5.2]
AMES_5566  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
AMES_9012  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
AMES_2725  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
AMES_1960  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
AMES_6615  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
AMES_0935  maf; septum formation protein [KO:K06287] [EC:3.6.1.-]
AMES_5930  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
AMES_5915  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
AMES_9053  nucleotidase [KO:K01081] [EC:3.1.3.5]
AMES_7700  surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AMES_3407  surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AMES_8380  nagD; NagD protein [KO:K02566] [EC:3.1.3.5]
AMES_0882  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
AMES_2717  pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
AMES_2546  indigoidine synthase A family protein [KO:K16329] [EC:4.2.1.70]
AMES_0857  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
AMES_1982  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
AMES_2870  codA; cytosine deaminase [KO:K03365] [EC:3.5.4.1 3.5.4.21]
AMES_6651  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
AMES_9043  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
AMES_2367  nrdA; ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
AMES_2850  nrdA; ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
AMES_8364  nrdB; ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
AMES_2849  nrdB; ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
AMES_7880  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
AMES_8655  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
AMES_2579  dut; dUTP pyrophosphatase [KO:K01520] [EC:3.6.1.23]
AMES_0858  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
AMES_4668  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
AMES_4059  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
AMES_6214  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
AMES_6546  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
AMES_6545  hydrolase [KO:K01431] [EC:3.5.1.6]
AMES_4714  N-carbamoyl-L-amino-acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
AMES_1259  N-carbamoyl-L-amino-acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
AMES_6795  short-chain dehydrogenase/reductase SDR [KO:K16066] [EC:1.1.1.381 1.1.1.-]
AMES_5265  hypothetical protein [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
amm00030  Pentose phosphate pathway
amm00220  Arginine biosynthesis
amm00250  Alanine, aspartate and glutamate metabolism
amm00280  Valine, leucine and isoleucine degradation
amm00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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