KEGG   PATHWAY: aprd00970
Entry
aprd00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Candidatus Absconditicoccus praedator
Class
Genetic Information Processing; Translation
Pathway map
aprd00970  Aminoacyl-tRNA biosynthesis
aprd00970

Organism
Candidatus Absconditicoccus praedator [GN:aprd]
Gene
HLG78_01875  tRNA-Ala [KO:K14218]
HLG78_01870  tRNA-Arg [KO:K14219]
HLG78_01590  tRNA-Asn [KO:K14220]
HLG78_01575  tRNA-Asp [KO:K14221]
HLG78_02035  tRNA-Gly [KO:K14225]
HLG78_01555  tRNA-Gly [KO:K14225]
HLG78_04710  tRNA-His [KO:K14226]
HLG78_01405  tRNA-Ile [KO:K14227]
HLG78_01560  tRNA-Ile [KO:K14230]
HLG78_01605  tRNA-Met [KO:K14230]
HLG78_01415  tRNA-Phe [KO:K14231]
HLG78_02980  tRNA-Ser [KO:K14233]
HLG78_04260  tRNA-Trp [KO:K14235]
HLG78_01705  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
HLG78_00630  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HLG78_00785  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
HLG78_03040  aspartyl/glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
HLG78_04855  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
HLG78_02170  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
HLG78_03260  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
HLG78_00820  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
HLG78_00480  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
HLG78_04745  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
HLG78_01905  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
HLG78_02815  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
HLG78_02550  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
HLG78_05065  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
HLG78_02165  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
HLG78_02020  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
HLG78_03820  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
HLG78_03480  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
HLG78_05105  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
HLG78_04425  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
HLG78_05190  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
HLG78_00595  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
HLG78_01995  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
HLG78_04050  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
aprd00250  Alanine, aspartate and glutamate metabolism
aprd00260  Glycine, serine and threonine metabolism
aprd00270  Cysteine and methionine metabolism
aprd00290  Valine, leucine and isoleucine biosynthesis
aprd00300  Lysine biosynthesis
aprd00330  Arginine and proline metabolism
aprd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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