KEGG   PATHWAY: atl00630
Entry
atl00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Actinocatenispora thailandica
Class
Metabolism; Carbohydrate metabolism
Pathway map
atl00630  Glyoxylate and dicarboxylate metabolism
atl00630

Module
atl_M00012  Glyoxylate cycle [PATH:atl00630]
atl_M00621  Glycine cleavage system [PATH:atl00630]
Other DBs
GO: 0046487 0043648
Organism
Actinocatenispora thailandica [GN:atl]
Gene
Athai_27130  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Athai_36110  acs_2; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
Athai_01960  hypothetical protein [KO:K01895] [EC:6.2.1.1]
Athai_09100  hypothetical protein [KO:K01895] [EC:6.2.1.1]
Athai_36740  aceB; malate synthase [KO:K01638] [EC:2.3.3.9]
Athai_52080  mdh_2; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Athai_26300  mdh_1; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Athai_03600  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
Athai_05520  citrate synthase [KO:K01647] [EC:2.3.3.1]
Athai_26180  gltA2; citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
Athai_33740  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
Athai_48940  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
Athai_40820  atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Athai_05350  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Athai_20750  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Athai_20740  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Athai_06620  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Athai_49990  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
Athai_50000  hypothetical protein [KO:K27095]
Athai_06550  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
Athai_36530  glcD_1; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
Athai_57360  glcD_2; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
Athai_57370  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
Athai_36520  glcF_1; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Athai_57380  glcF_2; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Athai_16320  catalase [KO:K03781] [EC:1.11.1.6]
Athai_36850  hydrolase [KO:K01091] [EC:3.1.3.18]
Athai_50780  hypothetical protein [KO:K01091] [EC:3.1.3.18]
Athai_36620  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Athai_37730  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Athai_23410  glnA4-1; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Athai_07270  glyA_1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Athai_26590  glyA_2; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Athai_28380  hypothetical protein [KO:K00281] [EC:1.4.4.2]
Athai_37430  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Athai_37460  pdhD_2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Athai_57390  pdhD_3; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Athai_28330  gcvH; glycine cleavage system H protein [KO:K02437]
Athai_42240  hypothetical protein [KO:K00865] [EC:2.7.1.165]
Athai_59680  2-keto-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Athai_06940  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Athai_16190  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
Athai_16170  ferredoxin [KO:K00124]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
atl00010  Glycolysis / Gluconeogenesis
atl00020  Citrate cycle (TCA cycle)
atl00030  Pentose phosphate pathway
atl00053  Ascorbate and aldarate metabolism
atl00071  Fatty acid degradation
atl00230  Purine metabolism
atl00250  Alanine, aspartate and glutamate metabolism
atl00260  Glycine, serine and threonine metabolism
atl00620  Pyruvate metabolism
atl00710  Carbon fixation by Calvin cycle
atl00750  Vitamin B6 metabolism
atl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system