KEGG   PATHWAY: atr00250
Entry
atr00250                    Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Amborella trichopoda
Class
Metabolism; Amino acid metabolism
Pathway map
atr00250  Alanine, aspartate and glutamate metabolism
atr00250

Module
atr_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:atr00250]
Other DBs
GO: 0006522 0006531 0006536
Organism
Amborella trichopoda [GN:atr]
Gene
18426621  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
18426336  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
18438519  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
18434856  L-aspartate oxidase, chloroplastic isoform X1 [KO:K00278] [EC:1.4.3.16]
18423768  probable isoaspartyl peptidase/L-asparaginase 2 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
18423924  probable isoaspartyl peptidase/L-asparaginase 2 isoform X2 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
18446097  isoaspartyl peptidase/L-asparaginase isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
18423831  asparagine synthetase [glutamine-hydrolyzing] 2 isoform X1 [KO:K01953] [EC:6.3.5.4]
18433448  asparagine synthetase [glutamine-hydrolyzing] isoform X2 [KO:K01953] [EC:6.3.5.4]
18439386  omega-amidase, chloroplastic isoform X1 [KO:K13566] [EC:3.5.1.3]
18439391  omega-amidase, chloroplastic-like isoform X1 [KO:K13566] [EC:3.5.1.3]
18423966  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
18433220  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
18422179  alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
18433551  alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like [KO:K00827] [EC:2.6.1.44 2.6.1.40]
18430615  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
18427602  argininosuccinate synthase, chloroplastic [KO:K01940] [EC:6.3.4.5]
18442655  argininosuccinate lyase, chloroplastic [KO:K01755] [EC:4.3.2.1]
18439990  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
18421871  uncharacterized protein LOC18421871 [KO:K01756] [EC:4.3.2.2]
18444321  aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
18439280  glutamate decarboxylase-like [KO:K01580] [EC:4.1.1.15]
18439282  glutamate decarboxylase 2 isoform X1 [KO:K01580] [EC:4.1.1.15]
18439292  glutamate decarboxylase [KO:K01580] [EC:4.1.1.15]
18448099  probable gamma-aminobutyrate transaminase 3, mitochondrial [KO:K16871] [EC:2.6.1.96]
18421656  succinate-semialdehyde dehydrogenase, mitochondrial isoform X2 [KO:K17761] [EC:1.2.1.24]
18442390  glutamate synthase 1 [NADH], chloroplastic [KO:K00264] [EC:1.4.1.14]
18421426  glutamate dehydrogenase 1 isoform X1 [KO:K00261] [EC:1.4.1.3]
18429157  glutamate dehydrogenase 2 isoform X1 [KO:K00261] [EC:1.4.1.3]
18443727  NADP-specific glutamate dehydrogenase isoform X1 [KO:K00262] [EC:1.4.1.4]
18431966  probable aldehyde dehydrogenase [KO:K00294] [EC:1.2.1.88]
18440614  glutamine synthetase leaf isozyme, chloroplastic isoform X2 [KO:K01915] [EC:6.3.1.2]
18423778  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
18423781  glutamine synthetase cytosolic isozyme [KO:K01915] [EC:6.3.1.2]
18433902  glutamine synthetase nodule isozyme isoform X1 [KO:K01915] [EC:6.3.1.2]
18438160  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
18444208  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
18426197  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 isoform X1 [KO:K00820] [EC:2.6.1.16]
18431987  amidophosphoribosyltransferase, chloroplastic [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
atr00010  Glycolysis / Gluconeogenesis
atr00020  Citrate cycle (TCA cycle)
atr00220  Arginine biosynthesis
atr00230  Purine metabolism
atr00240  Pyrimidine metabolism
atr00260  Glycine, serine and threonine metabolism
atr00261  Monobactam biosynthesis
atr00300  Lysine biosynthesis
atr00330  Arginine and proline metabolism
atr00340  Histidine metabolism
atr00410  beta-Alanine metabolism
atr00460  Cyanoamino acid metabolism
atr00470  D-Amino acid metabolism
atr00480  Glutathione metabolism
atr00520  Amino sugar and nucleotide sugar metabolism
atr00620  Pyruvate metabolism
atr00630  Glyoxylate and dicarboxylate metabolism
atr00650  Butanoate metabolism
atr00660  C5-Branched dibasic acid metabolism
atr00760  Nicotinate and nicotinamide metabolism
atr00770  Pantothenate and CoA biosynthesis
atr00860  Porphyrin metabolism
atr00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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