KEGG   PATHWAY: bamy00010
Entry
bamy00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Bacillus velezensis SQR9
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bamy00010  Glycolysis / Gluconeogenesis
bamy00010

Module
bamy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bamy00010]
bamy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bamy00010]
bamy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bamy00010]
bamy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bamy00010]
Other DBs
GO: 0006096 0006094
Organism
Bacillus velezensis SQR9 [GN:bamy]
Gene
V529_25910  glcK; GlcK [KO:K25026] [EC:2.7.1.2]
V529_30990  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
V529_29120  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
V529_36940  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
V529_39670  fbp; Fbp [KO:K04041] [EC:3.1.3.11]
V529_36970  fbaA; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
V529_33890  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
V529_33910  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
V529_28940  gapB; glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
V529_33900  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
V529_33880  pgm2; phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
V529_33870  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
V529_29110  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
V529_13990  pdhA; PdhA [KO:K00161] [EC:1.2.4.1]
V529_14000  pdhB; pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
V529_07750  acoC; branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
V529_14010  pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
V529_14020  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
V529_07760  acoL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
V529_25070  lpdV; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
V529_02920  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
V529_03190  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
V529_05170  adhB; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
V529_17080  adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase [KO:K13953] [EC:1.1.1.1]
V529_05060  adhA; protein AdhA [KO:K13979] [EC:1.1.1.2]
V529_29500  ywdH; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
V529_39560  aldX; AldX [KO:K00128] [EC:1.2.1.3]
V529_19360  dhaS; DhaS [KO:K00128] [EC:1.2.1.3]
V529_29390  ytcI; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
V529_29640  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
V529_18180  yoxA; YoxA protein [KO:K01785] [EC:5.1.3.3]
V529_08920  yhxB; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
V529_30380  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
V529_38480  licH; LicH [KO:K01222] [EC:3.2.1.86]
V529_19690  bglA; BglA [KO:K01223] [EC:3.2.1.86]
V529_38630  ydhP; beta-glucosidase [KO:K01223] [EC:3.2.1.86]
V529_23050  ypqE; PTS system glucose-specific transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
V529_13230  ptsG; PTS system D-glucosamine-specific transporter subunit IIA [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bamy00020  Citrate cycle (TCA cycle)
bamy00030  Pentose phosphate pathway
bamy00500  Starch and sucrose metabolism
bamy00620  Pyruvate metabolism
bamy00640  Propanoate metabolism
bamy00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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