KEGG   PATHWAY: bbev00630
Entry
bbev00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Salisediminibacterium beveridgei
Class
Metabolism; Carbohydrate metabolism
Pathway map
bbev00630  Glyoxylate and dicarboxylate metabolism
bbev00630

Module
bbev_M00012  Glyoxylate cycle [PATH:bbev00630]
bbev_M00621  Glycine cleavage system [PATH:bbev00630]
Other DBs
GO: 0046487 0043648
Organism
Salisediminibacterium beveridgei [GN:bbev]
Gene
BBEV_1993  aceA; Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BBEV_1518  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BBEV_1994  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
BBEV_0892  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BBEV_0890  citZ; Citrate synthase (si) [KO:K01647] [EC:2.3.3.1]
BBEV_1709  citB; Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
BBEV_0445  leuC-1; 3-isopropylmalate dehydratase large subunit [KO:K01681] [EC:4.2.1.3]
BBEV_0150  mmgA; 3-ketoacyl-CoA thiolase (isoleucine degradation) [KO:K00626] [EC:2.3.1.9]
BBEV_0893  enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
BBEV_1331  Acetyl-coenzyme A carboxyl transferase alpha beta chains [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BBEV_1330  B12 binding domain of Methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
BBEV_1329  bhbA; Methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
BBEV_1183  glcD-1; putative glycolate dehydrogenase, 2-subunit type, iron-sulfur subunit GlcD [KO:K00104] [EC:1.1.99.14]
BBEV_1184  glcF; Glycolate dehydrogenase, iron-sulfur subunit GlcF [KO:K11473] [EC:1.1.99.14]
BBEV_0638  gyaR; Glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
BBEV_2441  D-3-phosphoglycerate dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BBEV_0727  putative phosphatase of HAD hydrolase superfamily [KO:K01091] [EC:3.1.3.18]
BBEV_2144  gph; HAD-superfamily hydrolase, subfamily IA, variant 1 family protein [KO:K01091] [EC:3.1.3.18]
BBEV_1742  glnA; Glutamine synthetase type I [KO:K01915] [EC:6.3.1.2]
BBEV_0177  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BBEV_1289  gcvPA; Glycine dehydrogenase (decarboxylating) (glycine cleavage system P1 protein) [KO:K00282] [EC:1.4.4.2]
BBEV_1290  gcvPB; Glycine dehydrogenase (decarboxylating) (glycine cleavage system P2 protein) [KO:K00283] [EC:1.4.4.2]
BBEV_1288  gcvT; Aminomethyltransferase (glycine cleavage system T protein) [KO:K00605] [EC:2.1.2.10]
BBEV_1320  bfmBC; Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBEV_1960  pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
BBEV_0611  gcvH; Glycine cleavage system H protein [KO:K02437]
BBEV_2382  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
BBEV_0243  kdgA; 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BBEV_0718  fdnH; Formate dehydrogenase O beta subunit [KO:K00124]
BBEV_1394  hybA; 4Fe-4S oxidoreductase [KO:K00124]
BBEV_0719  fdxI; Formate dehydrogenase O gamma subunit [KO:K00127]
BBEV_1395  Formate dehydrogenase -O, gamma subunit [KO:K00127]
BBEV_1679  Acetamidase/Formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bbev00010  Glycolysis / Gluconeogenesis
bbev00020  Citrate cycle (TCA cycle)
bbev00030  Pentose phosphate pathway
bbev00053  Ascorbate and aldarate metabolism
bbev00071  Fatty acid degradation
bbev00230  Purine metabolism
bbev00250  Alanine, aspartate and glutamate metabolism
bbev00260  Glycine, serine and threonine metabolism
bbev00620  Pyruvate metabolism
bbev00750  Vitamin B6 metabolism
bbev00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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