KEGG   PATHWAY: bcan00630
Entry
bcan00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bradyrhizobium canariense
Class
Metabolism; Carbohydrate metabolism
Pathway map
bcan00630  Glyoxylate and dicarboxylate metabolism
bcan00630

Module
bcan_M00012  Glyoxylate cycle [PATH:bcan00630]
bcan_M00621  Glycine cleavage system [PATH:bcan00630]
bcan_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bcan00630]
Other DBs
GO: 0046487 0043648
Organism
Bradyrhizobium canariense [GN:bcan]
Gene
BcanWSM471_11330  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BcanWSM471_32265  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BcanWSM471_01475  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BcanWSM471_17165  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
BcanWSM471_06165  malate synthase G [KO:K01638] [EC:2.3.3.9]
BcanWSM471_02045  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BcanWSM471_21575  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BcanWSM471_02985  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
BcanWSM471_02990  citrate synthase family protein [KO:K01647] [EC:2.3.3.1]
BcanWSM471_06665  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
BcanWSM471_01995  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
BcanWSM471_22845  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_23615  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
BcanWSM471_27385  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_32425  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_33900  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_02770  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_04975  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_05835  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_08270  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_11185  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_13975  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_16980  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_17120  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
BcanWSM471_02775  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BcanWSM471_21890  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BcanWSM471_32370  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
BcanWSM471_23275  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
BcanWSM471_23695  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BcanWSM471_14550  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BcanWSM471_14565  methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
BcanWSM471_33145  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
BcanWSM471_33140  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
BcanWSM471_33135  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
BcanWSM471_00520  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
BcanWSM471_29600  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BcanWSM471_31300  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BcanWSM471_21090  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
BcanWSM471_22970  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BcanWSM471_31550  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
BcanWSM471_16250  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
BcanWSM471_12030  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
BcanWSM471_12035  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
BcanWSM471_26725  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BcanWSM471_02395  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BcanWSM471_22125  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BcanWSM471_35465  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
BcanWSM471_18160  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
BcanWSM471_22425  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BcanWSM471_25530  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
BcanWSM471_25520  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
BcanWSM471_21370  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BcanWSM471_02080  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BcanWSM471_25525  gcvH; glycine cleavage system protein GcvH [KO:K02437]
BcanWSM471_15145  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
BcanWSM471_15150  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
BcanWSM471_15155  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
BcanWSM471_05780  glycerate kinase [KO:K11529] [EC:2.7.1.165]
BcanWSM471_28860  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BcanWSM471_13880  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BcanWSM471_16975  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BcanWSM471_14965  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
BcanWSM471_09750  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
BcanWSM471_14975  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
BcanWSM471_09745  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
BcanWSM471_14980  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
BcanWSM471_14985  formate dehydrogenase subunit gamma [KO:K00127]
BcanWSM471_18095  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
BcanWSM471_26420  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BcanWSM471_08175  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BcanWSM471_35975  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
BcanWSM471_15115  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bcan00010  Glycolysis / Gluconeogenesis
bcan00020  Citrate cycle (TCA cycle)
bcan00030  Pentose phosphate pathway
bcan00053  Ascorbate and aldarate metabolism
bcan00071  Fatty acid degradation
bcan00230  Purine metabolism
bcan00250  Alanine, aspartate and glutamate metabolism
bcan00260  Glycine, serine and threonine metabolism
bcan00620  Pyruvate metabolism
bcan00710  Carbon fixation in photosynthetic organisms
bcan00750  Vitamin B6 metabolism
bcan00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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