KEGG   PATHWAY: bic00061
Entry
bic00061                    Pathway                                
Name
Fatty acid biosynthesis - Bradyrhizobium icense
Class
Metabolism; Lipid metabolism
Pathway map
bic00061  Fatty acid biosynthesis
bic00061

Module
bic_M00082  Fatty acid biosynthesis, initiation [PATH:bic00061]
bic_M00083  Fatty acid biosynthesis, elongation [PATH:bic00061]
bic_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:bic00061]
Other DBs
GO: 0006633
Organism
Bradyrhizobium icense [GN:bic]
Gene
LMTR13_01685  acetyl-CoA carboxylase carboxyltransferase subunit alpha [KO:K01962] [EC:6.4.1.2 2.1.3.15]
LMTR13_21575  acetyl-CoA carboxylase, biotin carboxyl carrier protein [KO:K02160]
LMTR13_21580  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01961] [EC:6.4.1.2 6.3.4.14]
LMTR13_00575  acetyl-CoA carboxylase subunit beta [KO:K01963] [EC:6.4.1.2 2.1.3.15]
LMTR13_24375  biotin carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
LMTR13_22690  malonyl CoA-acyl carrier protein transacylase [KO:K00645] [EC:2.3.1.39]
LMTR13_18385  3-oxoacyl-ACP synthase [KO:K00648] [EC:2.3.1.180]
LMTR13_00730  beta-ketoacyl-[acyl-carrier-protein] synthase I [KO:K00647] [EC:2.3.1.41]
LMTR13_22675  beta-ketoacyl-[acyl-carrier-protein] synthase II [KO:K09458] [EC:2.3.1.179]
LMTR13_15020  beta-ketoacyl-ACP synthase II [KO:K09458] [EC:2.3.1.179]
LMTR13_15025  beta-ketoacyl-ACP synthase II [KO:K09458] [EC:2.3.1.179]
LMTR13_30265  beta-ketoacyl-ACP synthase II [KO:K09458] [EC:2.3.1.179]
LMTR13_03680  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_03710  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_34345  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_22685  3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_35065  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_32245  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
LMTR13_29690  short-chain dehydrogenase [KO:K00059] [EC:1.1.1.100]
LMTR13_01890  oxidoreductase [KO:K00059] [EC:1.1.1.100]
LMTR13_00725  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA [KO:K01716] [EC:4.2.1.59 5.3.3.14]
LMTR13_01165  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA [KO:K01716] [EC:4.2.1.59 5.3.3.14]
LMTR13_19035  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [KO:K02372] [EC:4.2.1.59]
LMTR13_15030  beta-hydroxyacyl-ACP dehydratase [KO:K02372] [EC:4.2.1.59]
LMTR13_14330  enoyl-[acyl-carrier-protein] reductase [KO:K00208] [EC:1.3.1.9 1.3.1.10]
LMTR13_30420  enoyl-[acyl-carrier-protein] reductase [KO:K00208] [EC:1.3.1.9 1.3.1.10]
LMTR13_00735  trans-2-enoyl-CoA reductase [KO:K00209] [EC:1.3.1.9 1.3.1.44]
LMTR13_03525  long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
LMTR13_10870  AMP-dependent synthetase [KO:K01897] [EC:6.2.1.3]
LMTR13_14885  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
LMTR13_34725  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
LMTR13_28520  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
LMTR13_35415  dicarboxylate--CoA ligase PimA [KO:K01897] [EC:6.2.1.3]
LMTR13_35860  fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
LMTR13_36795  acyl-CoA synthetase [KO:K01897] [EC:6.2.1.3]
LMTR13_36835  AMP-dependent synthetase [KO:K01897] [EC:6.2.1.3]
LMTR13_25360  acyl-CoA synthetase [KO:K01897] [EC:6.2.1.3]
LMTR13_30210  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
Compound
C00024  Acetyl-CoA
C00083  Malonyl-CoA
C00154  Palmitoyl-CoA
C00173  Acyl-[acyl-carrier protein]
C00229  Acyl-carrier protein
C00249  Hexadecanoic acid
C00383  Malonate
C00638  Long-chain fatty acid
C00685  3-Oxoacyl-[acyl-carrier protein]
C00693  trans-2,3-Dehydroacyl-[acyl-carrier protein]
C00712  (9Z)-Octadecenoic acid
C01203  Oleoyl-[acyl-carrier protein]
C01209  Malonyl-[acyl-carrier protein]
C01271  (3R)-3-Hydroxyacyl-[acyl-carrier protein]
C01530  Octadecanoic acid
C01571  Decanoic acid
C02679  Dodecanoic acid
C02843  Long-chain acyl-CoA
C03939  Acetyl-[acyl-carrier protein]
C04088  Octadecanoyl-[acyl-carrier protein]
C04180  cis-Dec-3-enoyl-[acp]
C04246  But-2-enoyl-[acyl-carrier protein]
C04618  (3R)-3-Hydroxybutanoyl-[acyl-carrier protein]
C04619  (3R)-3-Hydroxydecanoyl-[acyl-carrier protein]
C04620  (3R)-3-Hydroxyoctanoyl-[acyl-carrier protein]
C04633  (3R)-3-Hydroxypalmitoyl-[acyl-carrier protein]
C04688  (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]
C05223  Dodecanoyl-[acyl-carrier protein]
C05744  Acetoacetyl-[acp]
C05745  Butyryl-[acp]
C05746  3-Oxohexanoyl-[acp]
C05747  (3R)-3-Hydroxyhexanoyl-[acyl-carrier protein]
C05748  trans-Hex-2-enoyl-[acp]
C05749  Hexanoyl-[acp]
C05750  3-Oxooctanoyl-[acp]
C05751  trans-Oct-2-enoyl-[acp]
C05752  Octanoyl-[acp]
C05753  3-Oxodecanoyl-[acp]
C05754  trans-Dec-2-enoyl-[acp]
C05755  Decanoyl-[acp]
C05756  3-Oxododecanoyl-[acp]
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05758  trans-Dodec-2-enoyl-[acp]
C05759  3-Oxotetradecanoyl-[acp]
C05760  trans-Tetradec-2-enoyl-[acp]
C05761  Tetradecanoyl-[acp]
C05762  3-Oxohexadecanoyl-[acp]
C05763  trans-Hexadec-2-enoyl-[acp]
C05764  Hexadecanoyl-[acp]
C06423  Octanoic acid
C06424  Tetradecanoic acid
C08362  (9Z)-Hexadecenoic acid
C16219  3-Oxostearoyl-[acp]
C16220  (3R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]
C16221  (2E)-Octadecenoyl-[acp]
C16520  Hexadecenoyl-[acyl-carrier protein]
C20683  Long-chain acyl-[acyl-carrier protein]
C20794  n-7 Unsaturated acyl-[acyl-carrier protein]
Reference
  Authors
Salas JJ, Ohlrogge JB.
  Title
Characterization of substrate specificity of plant FatA and FatB acyl-ACP thioesterases.
  Journal
Arch Biochem Biophys 403:25-34 (2002)
DOI:10.1016/S0003-9861(02)00017-6
Reference
  Authors
Zhang YM, Marrakchi H, White SW, Rock CO.
  Title
The application of computational methods to explore the diversity and structure of bacterial fatty acid synthase.
  Journal
J Lipid Res 44:1-10 (2003)
DOI:10.1194/jlr.R200016-JLR200
Reference
  Authors
Voelker T, Kinney AJ.
  Title
VARIATIONS IN THE BIOSYNTHESIS OF SEED-STORAGE LIPIDS.
  Journal
Annu Rev Plant Physiol Plant Mol Biol 52:335-361 (2001)
DOI:10.1146/annurev.arplant.52.1.335
Reference
  Authors
Barker GC, Larson TR, Graham IA, Lynn JR, King GJ.
  Title
Novel insights into seed fatty acid synthesis and modification pathways from genetic diversity and quantitative trait Loci analysis of the Brassica C genome.
  Journal
Plant Physiol 144:1827-42 (2007)
DOI:10.1104/pp.107.096172
Reference
  Authors
Bowman CE, Wolfgang MJ
  Title
Role of the malonyl-CoA synthetase ACSF3 in mitochondrial metabolism.
  Journal
Adv Biol Regul 71:34-40 (2019)
DOI:10.1016/j.jbior.2018.09.002
Reference
  Authors
Venkatesan R, Sah-Teli SK, Awoniyi LO, Jiang G, Prus P, Kastaniotis AJ, Hiltunen JK, Wierenga RK, Chen Z
  Title
Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase.
  Journal
Nat Commun 5:4805 (2014)
DOI:10.1038/ncomms5805
Reference
  Authors
Hiltunen JK, Chen Z, Haapalainen AM, Wierenga RK, Kastaniotis AJ
  Title
Mitochondrial fatty acid synthesis--an adopted set of enzymes making a pathway of major importance for the cellular metabolism.
  Journal
Prog Lipid Res 49:27-45 (2010)
DOI:10.1016/j.plipres.2009.08.001
Reference
  Authors
Kastaniotis AJ, Autio KJ, Keratar JM, Monteuuis G, Makela AM, Nair RR, Pietikainen LP, Shvetsova A, Chen Z, Hiltunen JK
  Title
Mitochondrial fatty acid synthesis, fatty acids and mitochondrial physiology.
  Journal
Biochim Biophys Acta Mol Cell Biol Lipids 1862:39-48 (2017)
DOI:10.1016/j.bbalip.2016.08.011
Related
pathway
bic00020  Citrate cycle (TCA cycle)
bic00071  Fatty acid degradation
bic00410  beta-Alanine metabolism
bic00561  Glycerolipid metabolism
bic00564  Glycerophospholipid metabolism
bic00620  Pyruvate metabolism
bic00785  Lipoic acid metabolism
KO pathway
ko00061   
LinkDB

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