KEGG   PATHWAY: bnd00630
Entry
bnd00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Brevundimonas nasdae
Class
Metabolism; Carbohydrate metabolism
Pathway map
bnd00630  Glyoxylate and dicarboxylate metabolism
bnd00630

Module
bnd_M00012  Glyoxylate cycle [PATH:bnd00630]
bnd_M00621  Glycine cleavage system [PATH:bnd00630]
bnd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bnd00630]
Other DBs
GO: 0046487 0043648
Organism
Brevundimonas nasdae [GN:bnd]
Gene
KWG56_09395  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KWG56_12810  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KWG56_12325  malate synthase G [KO:K01638] [EC:2.3.3.9]
KWG56_16075  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KWG56_04815  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
KWG56_12460  citrate synthase [KO:K01647] [EC:2.3.3.1]
KWG56_15975  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KWG56_15995  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
KWG56_10840  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KWG56_10925  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KWG56_13130  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KWG56_14490  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KWG56_17335  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KWG56_11390  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
KWG56_09950  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
KWG56_02040  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
KWG56_02025  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
KWG56_02015  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
KWG56_02030  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KWG56_02035  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KWG56_00975  catalase [KO:K03781] [EC:1.11.1.6]
KWG56_16005  catalase [KO:K03781] [EC:1.11.1.6]
KWG56_15445  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
KWG56_04155  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
KWG56_04960  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KWG56_05230  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KWG56_11850  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KWG56_11835  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
KWG56_09725  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
KWG56_09730  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
KWG56_09710  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KWG56_11845  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KWG56_06085  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KWG56_08525  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KWG56_14595  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KWG56_15230  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KWG56_09715  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KWG56_11840  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KWG56_16125  kinase [KO:K15918] [EC:2.7.1.31]
KWG56_18075  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KWG56_00410  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bnd00010  Glycolysis / Gluconeogenesis
bnd00020  Citrate cycle (TCA cycle)
bnd00030  Pentose phosphate pathway
bnd00053  Ascorbate and aldarate metabolism
bnd00071  Fatty acid degradation
bnd00230  Purine metabolism
bnd00250  Alanine, aspartate and glutamate metabolism
bnd00260  Glycine, serine and threonine metabolism
bnd00620  Pyruvate metabolism
bnd00710  Carbon fixation by Calvin cycle
bnd00750  Vitamin B6 metabolism
bnd00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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