KEGG   PATHWAY: bpet00630
Entry
bpet00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bordetella pertussis B1917
Class
Metabolism; Carbohydrate metabolism
Pathway map
bpet00630  Glyoxylate and dicarboxylate metabolism
bpet00630

Module
bpet_M00012  Glyoxylate cycle [PATH:bpet00630]
bpet_M00621  Glycine cleavage system [PATH:bpet00630]
Other DBs
GO: 0046487 0043648
Organism
Bordetella pertussis B1917 [GN:bpet]
Gene
B1917_1863  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
B1917_2288  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
B1917_0961  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
B1917_2320  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
B1917_3691  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
B1917_2277  mdH; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B1917_2270  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
B1917_2504  citrate synthase [KO:K01647] [EC:2.3.3.1]
B1917_1788  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
B1917_1795  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B1917_1299  hypothetical protein [KO:K00626] [EC:2.3.1.9]
B1917_0452  thiolase [KO:K00626] [EC:2.3.1.9]
B1917_3580  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B1917_1838  beta-ketothiolase [KO:K00626] [EC:2.3.1.9]
B1917_1877  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B1917_3397  thiolase [KO:K00626] [EC:2.3.1.9]
B1917_0334  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B1917_2704  fabG; 3-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
B1917_1301  hypothetical protein [KO:K17865] [EC:4.2.1.55]
B1917_0643  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
B1917_2973  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
B1917_0928  glcD; glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
B1917_0929  glcE; glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
B1917_0930  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
B1917_3863  katA; catalase [KO:K03781] [EC:1.11.1.6]
B1917_2212  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B1917_0287  2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B1917_3506  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
B1917_0558  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
B1917_3377  hydrolase [KO:K01091] [EC:3.1.3.18]
B1917_0881  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B1917_0201  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
B1917_0199  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
B1917_2721  odhL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
B1917_2852  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
B1917_3438  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
B1917_2106  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
B1917_0200  gcvH; glycine cleavage system protein H [KO:K02437]
B1917_3114  garK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
B1917_2199  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
B1917_1435  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
B1917_2385  fdhA; formate dehydrogenase large subunit [KO:K00123] [EC:1.17.1.9]
B1917_2382  fdhC; formate dehydrogenase subunit C [KO:K00127]
B1917_0303  esterase [KO:K01432] [EC:3.5.1.9]
B1917_2621  hypothetical protein [KO:K07130] [EC:3.5.1.9]
B1917_1345  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B1917_0568  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B1917_1438  fmdA; formamidase [KO:K01455] [EC:3.5.1.49]
B1917_1125  hypothetical protein [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bpet00010  Glycolysis / Gluconeogenesis
bpet00020  Citrate cycle (TCA cycle)
bpet00030  Pentose phosphate pathway
bpet00053  Ascorbate and aldarate metabolism
bpet00071  Fatty acid degradation
bpet00230  Purine metabolism
bpet00250  Alanine, aspartate and glutamate metabolism
bpet00260  Glycine, serine and threonine metabolism
bpet00620  Pyruvate metabolism
bpet00710  Carbon fixation by Calvin cycle
bpet00750  Vitamin B6 metabolism
bpet00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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