KEGG   PATHWAY: btj00630
Entry
btj00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia thailandensis E444
Class
Metabolism; Carbohydrate metabolism
Pathway map
btj00630  Glyoxylate and dicarboxylate metabolism
btj00630

Module
btj_M00012  Glyoxylate cycle [PATH:btj00630]
btj_M00621  Glycine cleavage system [PATH:btj00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia thailandensis E444 [GN:btj]
Gene
BTJ_443  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BTJ_5250  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BTJ_3947  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BTJ_3715  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BTJ_1167  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BTJ_438  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
BTJ_3993  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
BTJ_3528  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BTJ_4982  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BTJ_4989  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BTJ_4978  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BTJ_2365  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BTJ_584  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BTJ_692  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BTJ_697  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BTJ_2120  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BTJ_693  phbB-1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BTJ_4786  phbB-1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BTJ_3053  FAD binding domain protein [KO:K00104] [EC:1.1.99.14]
BTJ_3052  FAD binding domain protein [KO:K11472] [EC:1.1.99.14]
BTJ_3051  4Fe-4S binding domain protein [KO:K11473] [EC:1.1.99.14]
BTJ_2356  catalase family protein [KO:K03781] [EC:1.11.1.6]
BTJ_2150  ghrA; glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BTJ_95  NADP oxidoreductase coenzyme F420-dependent family protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BTJ_734  ghrB; glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BTJ_2853  gph; phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
BTJ_105  HAD hydrolase, IA, variant 1 family protein [KO:K01091] [EC:3.1.3.18]
BTJ_5368  haloacid dehalogenase-like hydrolase family protein [KO:K01091] [EC:3.1.3.18]
BTJ_226  glutamine synthetase, catalytic domain protein [KO:K01915] [EC:6.3.1.2]
BTJ_249  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
BTJ_3860  glutamine synthetase, catalytic domain protein [KO:K01915] [EC:6.3.1.2]
BTJ_3780  glyA2; serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
BTJ_3140  beta-eliminating lyase family protein [KO:K00600] [EC:2.1.2.1]
BTJ_2510  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
BTJ_2508  gcvT; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
BTJ_988  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTJ_4243  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTJ_271  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTJ_2509  gcvH; glycine cleavage system H protein [KO:K02437]
BTJ_610  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
BTJ_609  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
BTJ_608  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
BTJ_558  glycerate kinase family protein [KO:K00865] [EC:2.7.1.165]
BTJ_4531  glycerate kinase family protein [KO:K00865] [EC:2.7.1.165]
BTJ_4334  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BTJ_2981  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BTJ_5657  oxdD; oxalate decarboxylase oxdD [KO:K01569] [EC:4.1.1.2]
BTJ_5  NADH-dependent formate dehydrogenase delta subunit FdsD family protein [KO:K00126] [EC:1.17.1.9]
BTJ_6  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
BTJ_5029  Tat (twin-arginine translocation) pathway signal sequence domain protein [KO:K00123] [EC:1.17.1.9]
BTJ_5030  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
BTJ_5031  fdxH; formate dehydrogenase, beta subunit [KO:K00124]
BTJ_7  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein [KO:K00124]
BTJ_5032  formate dehydrogenase, gamma subunit [KO:K00127]
BTJ_8  respiratory-chain NADH dehydrogenase 24 Kd subunit [KO:K00127]
BTJ_1711  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
BTJ_3769  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BTJ_1969  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BTJ_224  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
btj00010  Glycolysis / Gluconeogenesis
btj00020  Citrate cycle (TCA cycle)
btj00030  Pentose phosphate pathway
btj00053  Ascorbate and aldarate metabolism
btj00071  Fatty acid degradation
btj00230  Purine metabolism
btj00250  Alanine, aspartate and glutamate metabolism
btj00260  Glycine, serine and threonine metabolism
btj00620  Pyruvate metabolism
btj00710  Carbon fixation by Calvin cycle
btj00750  Vitamin B6 metabolism
btj00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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