KEGG   PATHWAY: capf00970
Entry
capf00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Capnocytophaga sp. FDAARGOS_737
Class
Genetic Information Processing; Translation
Pathway map
capf00970  Aminoacyl-tRNA biosynthesis
capf00970

Organism
Capnocytophaga sp. FDAARGOS_737 [GN:capf]
Gene
FOC45_00530  tRNA-Ala [KO:K14218]
FOC45_01495  tRNA-Ala [KO:K14218]
FOC45_05570  tRNA-Ala [KO:K14218]
FOC45_01230  tRNA-Ala [KO:K14218]
FOC45_07500  tRNA-Ala [KO:K14218]
FOC45_03910  tRNA-Arg [KO:K14219]
FOC45_02945  tRNA-Arg [KO:K14219]
FOC45_09805  tRNA-Arg [KO:K14219]
FOC45_09915  tRNA-Arg [KO:K14219]
FOC45_01095  tRNA-Asn [KO:K14220]
FOC45_02575  tRNA-Asp [KO:K14221]
FOC45_10865  tRNA-Cys [KO:K14222]
FOC45_00710  tRNA-Gln [KO:K14223]
FOC45_08390  tRNA-Glu [KO:K14224]
FOC45_08395  tRNA-Glu [KO:K14224]
FOC45_11000  tRNA-Gly [KO:K14225]
FOC45_08020  tRNA-Gly [KO:K14225]
FOC45_08010  tRNA-Gly [KO:K14225]
FOC45_04195  tRNA-Gly [KO:K14225]
FOC45_01195  tRNA-His [KO:K14226]
FOC45_01225  tRNA-Ile [KO:K14227]
FOC45_01490  tRNA-Ile [KO:K14227]
FOC45_00525  tRNA-Ile [KO:K14227]
FOC45_07505  tRNA-Ile [KO:K14227]
FOC45_08015  tRNA-Leu [KO:K14228]
FOC45_03470  tRNA-Leu [KO:K14228]
FOC45_06455  tRNA-Leu [KO:K14228]
FOC45_10745  tRNA-Leu [KO:K14228]
FOC45_03475  tRNA-Lys [KO:K14229]
FOC45_03485  tRNA-Lys [KO:K14229]
FOC45_03480  tRNA-Lys [KO:K14229]
FOC45_00250  tRNA-Ile [KO:K14230]
FOC45_05555  tRNA-Met [KO:K14230]
FOC45_07210  tRNA-Met [KO:K14230]
FOC45_10920  tRNA-Phe [KO:K14231]
FOC45_03905  tRNA-Pro [KO:K14232]
FOC45_05385  tRNA-Pro [KO:K14232]
FOC45_05020  tRNA-Ser [KO:K14233]
FOC45_03900  tRNA-Ser [KO:K14233]
FOC45_08725  tRNA-Ser [KO:K14233]
FOC45_02630  tRNA-Thr [KO:K14234]
FOC45_10995  tRNA-Thr [KO:K14234]
FOC45_11010  tRNA-Thr [KO:K14234]
FOC45_10985  tRNA-Trp [KO:K14235]
FOC45_05960  tRNA-Tyr [KO:K14236]
FOC45_11005  tRNA-Tyr [KO:K14236]
FOC45_07355  tRNA-Val [KO:K14237]
FOC45_07360  tRNA-Val [KO:K14237]
FOC45_07350  tRNA-Val [KO:K14237]
FOC45_06755  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
FOC45_00940  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
FOC45_04260  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
FOC45_11900  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
FOC45_09060  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
FOC45_09980  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
FOC45_11550  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
FOC45_10645  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
FOC45_07000  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
FOC45_03280  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
FOC45_08695  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
FOC45_09490  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
FOC45_11680  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
FOC45_10615  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
FOC45_02740  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
FOC45_08005  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
FOC45_02590  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
FOC45_02035  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
FOC45_00700  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
FOC45_10265  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
FOC45_02030  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
FOC45_09155  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
capf00250  Alanine, aspartate and glutamate metabolism
capf00260  Glycine, serine and threonine metabolism
capf00270  Cysteine and methionine metabolism
capf00290  Valine, leucine and isoleucine biosynthesis
capf00300  Lysine biosynthesis
capf00330  Arginine and proline metabolism
capf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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