KEGG   PATHWAY: cdl00010
Entry
cdl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Clostridioides difficile R20291
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cdl00010  Glycolysis / Gluconeogenesis
cdl00010

Module
cdl_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cdl00010]
cdl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cdl00010]
cdl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cdl00010]
Other DBs
GO: 0006096 0006094
Organism
Clostridioides difficile R20291 [GN:cdl]
Gene
CDR20291_2352  glcK; glucokinase [KO:K25026] [EC:2.7.1.2]
CDR20291_3146  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CDR20291_3217  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
CDR20291_2948  putative phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
CDR20291_1029  fbp; putative fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
CDR20291_0374  fba; putative fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CDR20291_2979  putative sugar-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CDR20291_3028  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
CDR20291_3030  gapB; glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K00134] [EC:1.2.1.12]
CDR20291_1662  gapA; glyceraldehyde-3-phosphate dehydrogenase 1 [KO:K00150] [EC:1.2.1.59]
CDR20291_3029  pgK; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CDR20291_3027  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
CDR20291_3026  eno; 2-phospho-d-glycerate hydro-lyase [KO:K01689] [EC:4.2.1.11]
CDR20291_3216  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CDR20291_2301  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
CDR20291_0027  acoC; E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
CDR20291_0650  putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, dihydrolipoyl dehydrogenase subunit [KO:K00382] [EC:1.8.1.4]
CDR20291_0028  acoL; E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase) [KO:K00382] [EC:1.8.1.4]
CDR20291_2570  nifJ; pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
CDR20291_0115  putative oxidoreductase, thiamine diP-binding subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDR20291_2105  putative subunit of oxidoreductase [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDR20291_2320  putative oxidoreductase subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CDR20291_2104  putative subunit of oxidoreductase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDR20291_0116  putative subunit of oxidoreductase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDR20291_2319  putative oxidoreductase subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CDR20291_2070  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
CDR20291_2800  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
CDR20291_0339  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
CDR20291_2113  aldH; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
CDR20291_2102  putative acetyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
CDR20291_2668  pgm2; putative phosphomannomutase/phosphoglycerate mutase [KO:K01835] [EC:5.4.2.2]
CDR20291_1474  pgm1; putative phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CDR20291_0507  gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
CDR20291_2778  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
CDR20291_0360  bglA; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_2934  bglA1; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_2954  bglA2; 6-phospho-beta-glucosidase BglA [KO:K01223] [EC:3.2.1.86]
CDR20291_2968  ascB2; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_2974  acsB3; putative 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_2918  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_0748  putative 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
CDR20291_2404  PTS system, IIa component [KO:K02777] [EC:2.7.1.-]
CDR20291_2862  crr; PTS system, glucose-specific IIa component [KO:K02777] [EC:2.7.1.-]
CDR20291_2941  putative PTS syste, IIa component [KO:K02777] [EC:2.7.1.-]
CDR20291_2554  crr; PTS system, glucose-specific IIa component [KO:K02777] [EC:2.7.1.-]
CDR20291_2892  PTS system, IIa component [KO:K02777] [EC:2.7.1.-]
CDR20291_2402  PTS system, IIbc component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CDR20291_2865  malX; PTS system, maltose and glucose-specific IIbc component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CDR20291_1177  malX; PTS system, maltose and glucose-specific IIbc component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cdl00020  Citrate cycle (TCA cycle)
cdl00030  Pentose phosphate pathway
cdl00500  Starch and sucrose metabolism
cdl00620  Pyruvate metabolism
cdl00640  Propanoate metabolism
cdl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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