KEGG   PATHWAY: cfil00970
Entry
cfil00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Chitinophaga filiformis
Class
Genetic Information Processing; Translation
Pathway map
cfil00970  Aminoacyl-tRNA biosynthesis
cfil00970

Organism
Chitinophaga filiformis [GN:cfil]
Gene
MYF79_06520  tRNA-Ala [KO:K14218]
MYF79_07115  tRNA-Ala [KO:K14218]
MYF79_07135  tRNA-Ala [KO:K14218]
MYF79_05620  tRNA-Arg [KO:K14219]
MYF79_18975  tRNA-Arg [KO:K14219]
MYF79_18985  tRNA-Arg [KO:K14219]
MYF79_19020  tRNA-Arg [KO:K14219]
MYF79_05585  tRNA-Arg [KO:K14219]
MYF79_26105  tRNA-Arg [KO:K14219]
MYF79_03015  tRNA-Asn [KO:K14220]
MYF79_29090  tRNA-Asp [KO:K14221]
MYF79_29140  tRNA-Asp [KO:K14221]
MYF79_29400  tRNA-Asp [KO:K14221]
MYF79_16080  tRNA-Cys [KO:K14222]
MYF79_08700  tRNA-Gln [KO:K14223]
MYF79_08905  tRNA-Gln [KO:K14223]
MYF79_06845  tRNA-Glu [KO:K14224]
MYF79_06935  tRNA-Glu [KO:K14224]
MYF79_25555  tRNA-Gly [KO:K14225]
MYF79_27615  tRNA-Gly [KO:K14225]
MYF79_28035  tRNA-Gly [KO:K14225]
MYF79_28040  tRNA-Gly [KO:K14225]
MYF79_08570  tRNA-Gly [KO:K14225]
MYF79_25535  tRNA-Gly [KO:K14225]
MYF79_25475  tRNA-His [KO:K14226]
MYF79_25390  tRNA-His [KO:K14226]
MYF79_02950  tRNA-Ile [KO:K14227]
MYF79_07110  tRNA-Ile [KO:K14227]
MYF79_06475  tRNA-Leu [KO:K14228]
MYF79_12665  tRNA-Leu [KO:K14228]
MYF79_13715  tRNA-Leu [KO:K14228]
MYF79_28060  tRNA-Leu [KO:K14228]
MYF79_20155  tRNA-Leu [KO:K14228]
MYF79_20355  tRNA-Leu [KO:K14228]
MYF79_31200  tRNA-Lys [KO:K14229]
MYF79_14130  tRNA-Lys [KO:K14229]
MYF79_14465  tRNA-Lys [KO:K14229]
MYF79_16275  tRNA-Lys [KO:K14229]
MYF79_03245  tRNA-Ile [KO:K14230]
MYF79_07725  tRNA-Met [KO:K14230]
MYF79_17190  tRNA-Met [KO:K14230]
MYF79_28640  tRNA-Met [KO:K14230]
MYF79_03855  tRNA-Phe [KO:K14231]
MYF79_00675  tRNA-Pro [KO:K14232]
MYF79_23555  tRNA-Pro [KO:K14232]
MYF79_21985  tRNA-Pro [KO:K14232]
MYF79_25750  tRNA-Ser [KO:K14233]
MYF79_00870  tRNA-Ser [KO:K14233]
MYF79_01310  tRNA-Ser [KO:K14233]
MYF79_08560  tRNA-Thr [KO:K14234]
MYF79_04145  tRNA-Thr [KO:K14234]
MYF79_08575  tRNA-Thr [KO:K14234]
MYF79_08590  tRNA-Trp [KO:K14235]
MYF79_08565  tRNA-Tyr [KO:K14236]
MYF79_28815  tRNA-Val [KO:K14237]
MYF79_28820  tRNA-Val [KO:K14237]
MYF79_01285  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
MYF79_06710  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
MYF79_02320  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
MYF79_30120  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
MYF79_02765  hypothetical protein [KO:K02435] [EC:6.3.5.6 6.3.5.7]
MYF79_01280  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
MYF79_02300  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
MYF79_06125  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
MYF79_04990  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
MYF79_02130  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
MYF79_19165  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
MYF79_01150  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
MYF79_11130  aminotransferase class V-fold PLP-dependent enzyme [KO:K01042] [EC:2.9.1.1]
MYF79_04265  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
MYF79_30995  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
MYF79_28350  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
MYF79_27020  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
MYF79_06310  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
MYF79_02065  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
MYF79_02585  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
MYF79_11270  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
MYF79_13770  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
MYF79_30820  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
MYF79_03470  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
MYF79_32070  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
MYF79_07575  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
MYF79_30115  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cfil00250  Alanine, aspartate and glutamate metabolism
cfil00260  Glycine, serine and threonine metabolism
cfil00270  Cysteine and methionine metabolism
cfil00290  Valine, leucine and isoleucine biosynthesis
cfil00300  Lysine biosynthesis
cfil00330  Arginine and proline metabolism
cfil00340  Histidine metabolism
cfil00380  Tryptophan metabolism
cfil00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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