KEGG   PATHWAY: cfy00630
Entry
cfy00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Corynebacterium freneyi
Class
Metabolism; Carbohydrate metabolism
Pathway map
cfy00630  Glyoxylate and dicarboxylate metabolism
cfy00630

Module
cfy_M00012  Glyoxylate cycle [PATH:cfy00630]
cfy_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:cfy00630]
Other DBs
GO: 0046487 0043648
Organism
Corynebacterium freneyi [GN:cfy]
Gene
I6L56_09560  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
I6L56_07020  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
I6L56_09565  malate synthase G [KO:K01638] [EC:2.3.3.9]
I6L56_11980  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
I6L56_06370  citrate synthase [KO:K01647] [EC:2.3.3.1]
I6L56_02660  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
I6L56_06805  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
I6L56_07855  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
I6L56_10920  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
I6L56_00575  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
I6L56_06230  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
I6L56_06205  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
I6L56_06200  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
I6L56_06210  acyl-CoA carboxylase subunit epsilon [KO:K27095]
I6L56_02735  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
I6L56_02740  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
I6L56_08790  catalase [KO:K03781] [EC:1.11.1.6]
I6L56_09255  catalase [KO:K03781] [EC:1.11.1.6]
I6L56_04265  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
I6L56_04280  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
I6L56_04395  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
I6L56_05280  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
I6L56_06295  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
I6L56_09550  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
I6L56_03590  glycerate kinase [KO:K00865] [EC:2.7.1.165]
I6L56_00255  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
I6L56_09615  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cfy00010  Glycolysis / Gluconeogenesis
cfy00020  Citrate cycle (TCA cycle)
cfy00030  Pentose phosphate pathway
cfy00071  Fatty acid degradation
cfy00230  Purine metabolism
cfy00250  Alanine, aspartate and glutamate metabolism
cfy00260  Glycine, serine and threonine metabolism
cfy00620  Pyruvate metabolism
cfy00710  Carbon fixation by Calvin cycle
cfy00750  Vitamin B6 metabolism
cfy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system