KEGG   PATHWAY: cide00630
Entry
cide00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ctenopharyngodon idella (grass carp)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cide00630  Glyoxylate and dicarboxylate metabolism
cide00630

Module
cide_M00621  Glycine cleavage system [PATH:cide00630]
cide_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:cide00630]
Other DBs
GO: 0046487 0043648
Organism
Ctenopharyngodon idella (grass carp) [GN:cide]
Gene
127507092  acyl-CoA synthetase short chain family member 2 like [KO:K01895] [EC:6.2.1.1]
127504995  acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
127498950  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
127521393  malate dehydrogenase 1Aa, NAD (soluble) isoform X1 [KO:K00025] [EC:1.1.1.37]
127498144  malate dehydrogenase 1Ab, NAD (soluble) [KO:K00025] [EC:1.1.1.37]
127521451  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
127504453  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
127515593  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
127523746  aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
127521213  acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]
127501888  acetyl-CoA acetyltransferase, cytosolic [KO:K00626] [EC:2.3.1.9]
127515461  methylmalonyl-CoA epimerase, mitochondrial [KO:K05606] [EC:5.1.99.1]
127509221  propionyl-CoA carboxylase alpha chain, mitochondrial [KO:K01965] [EC:6.4.1.3]
127525734  propionyl-CoA carboxylase beta chain, mitochondrial [KO:K01966] [EC:6.4.1.3 2.1.3.15]
127502288  methylmalonyl-CoA mutase, mitochondrial [KO:K01847] [EC:5.4.99.2]
127518657  hydroxyacid oxidase 2 isoform X1 [KO:K11517] [EC:1.1.3.15]
127498100  hydroxyacid oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
127507207  catalase [KO:K03781] [EC:1.11.1.6]
127514512  glyoxylate reductase/hydroxypyruvate reductase b [KO:K00049] [EC:1.1.1.79 1.1.1.81]
127494055  glyoxylate reductase/hydroxypyruvate reductase [KO:K00049] [EC:1.1.1.79 1.1.1.81]
127523996  glycerol-3-phosphate phosphatase [KO:K19269] [EC:3.1.3.18 3.1.3.48]
127522069  alanine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
127494912  alanine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
127514210  alanine--glyoxylate and serine--pyruvate aminotransferase a [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
127514534  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
127499809  glutamate-ammonia ligase (glutamine synthase) a [KO:K01915] [EC:6.3.1.2]
127504324  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
127509530  serine hydroxymethyltransferase, cytosolic [KO:K00600] [EC:2.1.2.1]
127513883  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
127512970  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
127517731  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
127507420  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
127499498  glycine cleavage system protein H (aminomethyl carrier), a [KO:K02437]
127515742  glycine cleavage system protein H (aminomethyl carrier), b [KO:K02437]
127514063  putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
127514715  glycerate kinase [KO:K11529] [EC:2.7.1.165]
127520584  4-hydroxy-2-oxoglutarate aldolase, mitochondrial [KO:K18123] [EC:4.1.3.16]
127522880  kynurenine formamidase [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cide00010  Glycolysis / Gluconeogenesis
cide00020  Citrate cycle (TCA cycle)
cide00030  Pentose phosphate pathway
cide00053  Ascorbate and aldarate metabolism
cide00071  Fatty acid degradation
cide00230  Purine metabolism
cide00250  Alanine, aspartate and glutamate metabolism
cide00260  Glycine, serine and threonine metabolism
cide00620  Pyruvate metabolism
cide00750  Vitamin B6 metabolism
cide00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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